Gene Amir_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1877 
Symbol 
ID8326062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2077405 
End bp2078571 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content71% 
IMG OID644942426 
ProductEndonuclease I 
Protein accessionYP_003099671 
Protein GI256376011 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACCG CGGTGGCCGC CCTCGCCGCG GCACTGCTGA TCCCCGACCG CGCCGCGTCG 
GGGGCCGCCG CCCCGCTCAC CGTCACGCAG GCCGTCGCCC AGCAGGGCGG CTCCACGGCC
ACCGTGCGCG GCTACGTCGT CGGCCAGCCG ACGGCCACCA GCACCGTCGT GCGGGCGAAC
TTCCCGAACG ACTACGCCCT CGCCCTCGCC GACTCGCCCA CCCAGACCTC CACCGGCCAG
ATGCTCTACG TCCAGATCAC CGCGTCGTTC CGCGCCGCGT GGGGCCTGAA GAGCAACCCT
GGCCTGCTGG GCGCCCGGAT CGACGTCACC GGCCCCCTCA ACGCCTACTT CTCGCACGCG
GGCCTGACCT CCCCGTCCGC GTTCGCCCGC GCCGACAGCG GCGGCGGCAC CACCACGACC
ACCACGCGGG TCACCACGAC CACGCCCGGC GTCACCACCA CGACCCGGCC CGGCGGGAAC
GACTCCTACT ACCAGGCCGC GATCGGCAAG ACCGGCTCCG CGCTGAAGTC CGCGCTGCAC
ACCATCATCA GCACCGGCGC GCGCAAGCTC AGCTACGACC AGGTGTGGGA AGCGCTGCGC
AACACCGACC AGGACCCCGG CAACAGCAAC AACGTCGTCC TGCTGTACTC CGGCCGCTCC
CAGTCCAAGA CCGCCAACGG CGGCAACCCC GACGACTGGA ACCGCGAGCA CGTCTGGGCC
AAGTCACACG GCGACTTCGG CACCGCCACC GGTCCCGGCA CCGACCTGCA CCACCTGCGC
CCCGAGGACG TGTCGGTCAA CTCCGAGCGC GGCAACAAGG ACTTCGACAA CGGCGGCACC
GCCGTCGGCG AGGCTCCCGG AAACCGCACC GACTCCGACT CGTGGGAGCC GCGCGACGCC
GTCAAGGGCG ACGTCGCCCG GATGATCTTC TACATGGCCG TCCGCTACGA GGGCACGGAC
GGCTGGCCGG ACCTGGAGGT CAACAACAGC GTCTCCAACG GCAGCAAGCC CAACATCGGC
AAGCTGACCG TGCTCCTGCA GTGGCACGCC CAGGACCCGC CGGACTCCTT CGAGCAGCGG
CGCAACCAGG TCATCCAGGA CAGCTACCAG GGCAACCGCA ACCCCTTCGT CGACCACCCG
GAGTGGGTTT CCTCCATCTG GGGCTGA
 
Protein sequence
MFTAVAALAA ALLIPDRAAS GAAAPLTVTQ AVAQQGGSTA TVRGYVVGQP TATSTVVRAN 
FPNDYALALA DSPTQTSTGQ MLYVQITASF RAAWGLKSNP GLLGARIDVT GPLNAYFSHA
GLTSPSAFAR ADSGGGTTTT TTRVTTTTPG VTTTTRPGGN DSYYQAAIGK TGSALKSALH
TIISTGARKL SYDQVWEALR NTDQDPGNSN NVVLLYSGRS QSKTANGGNP DDWNREHVWA
KSHGDFGTAT GPGTDLHHLR PEDVSVNSER GNKDFDNGGT AVGEAPGNRT DSDSWEPRDA
VKGDVARMIF YMAVRYEGTD GWPDLEVNNS VSNGSKPNIG KLTVLLQWHA QDPPDSFEQR
RNQVIQDSYQ GNRNPFVDHP EWVSSIWG