| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1873 |
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| Symbol | |
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| ID | 8326058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2071212 |
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| End bp | 2074439 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942422 |
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| Product | alpha-1,2-mannosidase |
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| Protein accession | YP_003099667 |
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| Protein GI | 256376007 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
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| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTCC CGCGAGGCAG CACAGCACTG GCCGCCGCAG CACTGCTCGT GCTCGGAGCG
GCCGTCCCAG CCCAGGCCCA GCCATCGTCC GGGAGCGCGG CGGAGGACCC CGTCACCCTG
GTCAACCCGT TCGTCGGCAC CCAGAACTTC GGCAACACCT TCCCCGGCGC GAGCGCCCCG
TTCGGCATGG TCCAGGTCAG CCCGGACACC GGAGGCCAGG GCGGCTACGA CTACCAGCAG
GGCTTCATCC ACGGCTTCAG CCAGACCCAC CTGTCCGGCG TCGGCTGCCC CGTCGCGGGC
GAGCTGCCGA TCATGCCCAC CACCGGCGCG GTCACCAGCA CCGACCACAA CGCCTACCGG
TCCGCCTACA GCCACGACGA CGAGGAGGCC GAACCCGGCT ACTACCGCGT GGGCCTCCAG
CGGTACGGCA TCGGCGTCGA GCTGACCGCC ACCCCGCGCA CCGGCTGGCA GCGCTACTCG
TTCCCGGCGG GCGCGAGCGG CAACGTGCTG CTCAACACCG GCAAGGCCAA CCAGCAGGTG
CTCGACTCGC AGGTGCGGGT GGTCGACGAC CGGACCGTGG AGGGCCGGGT GCGGGCCGGG
CGGTTCTGCG CCGGGCTGGA CGAGCACACG GTGTACTTCA CCGCCTCGTT CGACCGGCCG
TTCCAGGCGT TCGGGACCTG GCGCGGCGGC TCGGTCGCGC CCGGCGCGCG GGAGGCGTCG
GGCAGCGGCG GCAACGGGGC CTACGCCACG TTCGACACCA CCGCCGACCG GGACGTCGTG
GTCAAGGTCG GCCTGTCCTA CACCGGGATC GAGGGCGCGC GGAAGAACCT GGCCGCCGAG
ACCGACGGCC ACGACTTCGA CGCCGCCCGC GCCGCGCTGC GGCGGACCTG GCAGGAGCAG
CTGGGGCGCG TGGAGATCGG CGGCGGGACC CTGGAGCGCC GCAAGGCGTT CTACACCTCG
CTCTACCACT CGGTGCTGCA CCCGAACCTC GCCGGGGACG TGGACGGCCG CTACACCGCG
TTCGGCGGGC AGGTGAAGCA GGCGCAGGAC TTCACGCCGC ACCAGAACTT CTCGCTGTGG
GACACCTACC GCCCGCAGAA CCAGCTCCTC GAACTCCTCG AACCCGAGGT GGCGCGGGAC
GTCGCGCTGT CGGTCCTCGC GGCGGGCCGC GACGGCGGCT GGCTGCCGAG GTGGGCGCTG
GCCAACAGCG AGACCAACAT CATGACCGGC GACCCGGTCA CCCCCTTCCT GGTCGAGGCG
TGGTCGCGCG GGCTGCTGAA GGGCCACGAG GCCGAGGCGT ACGAGCTGCT CAAGCGCAAC
GCCACCAGCC TGCCGCCGGA CGACTCGCCG TACAACGGGC GCTCCGGCGT CGAGCACTAC
CTGGAGCGCG GCTACGTGCC GTCCGGGCTG GAGAAGGGCG TGGACTGCCC CCACAAGGGC
GGCGACAACG ACTGCGCCCA CCCGGCGTCC GCCACGCTGG AGTACGCGGC GGCCGACGCC
GCGCTCGCCC TGATGGCGGA AGGGTTGGGG CAGAAGGAGG ACGCGCGCAC GTTCGCCGCG
CGCGGCAAGT GGTACCGCAA CCTCTGGGAC TCCGGCACCA AGCACTTCCG GCCGCGCACC
CAGGACGGCA CCTGGCTCGC CCCGTACGAC CCGGTCGAGG CGGGGCGCCA GTTCCACGAG
GGCGGCGCGT ACCAGTACCA GTGGCTCGTG CCGCAGGACC CGGACGGGCT GGTCGACCTG
ATGGGCGGGC GGCGCGAGGC CGAGCGCAGG CTCGACGCGT TCTTCGCCCA CGACAAGCTG
CTCGCCGACC CCGAGGGCAC CGCGCGCACC GAGTGGATCA CCCAGCCGTA CGACTACTAC
GGCAAGCCGA CCTACAACCC GAACAACGAG CCCGACCTGC ACGCGCCGTA CACCTACCTG
TCGGTGGGCG CGCCCGCGAA GACCGCGACC GTGGTGCGGG CGGCCATGAC CCTGTTCACC
GACGGCCCGG ACGGCATGAC CGGCAACGAC GACCTGGGCA CGATGTCCGC CTGGTACGTG
TTCTCCTCGC TGGGCCTGTA CCCGACGATG AGCGGAGCCG GCTTCTTCGC CCTGTCCAGC
CCGCAGTTCC CCAGCGCGAC CGTCCACATC GGAGACAAGC GGTTCGCCAT CACCGCGCCG
GGGGCCAGCG ACGCCAACCG CTACGTGCAG CGGGTGTCGT TGAACGGCAA GGACGTGCGC
AAGACCTGGC TGTCCTGGGA CGACGTGGCG CGGGGCGGCG CCCTCCAGCA CCGGCTCGGC
ACGTCCCCGT CGACCTGGGG CACCTCCGTC GACGCCAGGC CGCCGTCGAT CAGCCGGGGC
CTGCCGGACA CCCGCTCGCA CCTGGACGCC TCGCTGCGGC CGTCGACCGC CGTGCTGCCG
ACCTCGGCCG AGCAGCGCAC GGTGCCGTTC GCGCTGGACG TGCTCGCCCA GTCCCCGCTC
GTGCTGCCGG TGTCGCTCAC CGCGTCCGCG CCTCCGGGGT GGCGGGTTCC GCTGCGCCCC
TTGGTGATCC CGTCCTTCAC GCTGCCCGCG CAGCGCGAGG TCGAGGTCCC GGTGACCATC
CCGGCGAACA CCCCGCCCGG AACGTACGAG GTGACGGTGA CCGCGCGCGG GCCCGACACC
ACCACGACGA AGGTCGCCGT GGAGATCAGG GAAGCGGCGG CGTGCGCGGC GAGCGGCGAC
GGGTGGTGCG CGGTCGACCT GTCCACCGCG CTCAACCACG ACGGCGCGGC CACCGTCGCG
GCCCCCGGCG AGGGCGACTT CGACGGCGGC GGCTGGAGCT ACGACGCGGC GCTGCTGCCC
ACCGGTCAGG TGGTGTGGGG CGGGATCACC TACGTCGCCC CCGACACCTC CGGGACCGCG
CCCAACTTCG TGGAGGCGCG CGGGCAGGCG CTGCTGCTGC CCGAGGGCAG GTACCCGGCG
CTGAACCTGG TGGGCGCGGC GCACAACGGG CCCGTCGGCA CGGCGGTGAC CGTCCGCTAC
ACCGACGGGA CCAGCGCCTC CGCGCCGGTG GTCGTGGCCG ACTGGGCCGG TTCGGGCAGC
GCGGCCGTGC TGGAGATGCC GCACCGGATC AAGGCCGGCT CCGGGGTGGA CTCGCCGCCG
GTGCGGCTGT TCGGCCACCG CGTGGCGCTC GATCCGGCGA AGGTGGTTCA GTCGTTCGTG
CTGCCTGCCG ATCCCAGGGT CGAGGTGTTC GCGGCCACCC TCGGGTGA
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| Protein sequence | MTLPRGSTAL AAAALLVLGA AVPAQAQPSS GSAAEDPVTL VNPFVGTQNF GNTFPGASAP
FGMVQVSPDT GGQGGYDYQQ GFIHGFSQTH LSGVGCPVAG ELPIMPTTGA VTSTDHNAYR
SAYSHDDEEA EPGYYRVGLQ RYGIGVELTA TPRTGWQRYS FPAGASGNVL LNTGKANQQV
LDSQVRVVDD RTVEGRVRAG RFCAGLDEHT VYFTASFDRP FQAFGTWRGG SVAPGAREAS
GSGGNGAYAT FDTTADRDVV VKVGLSYTGI EGARKNLAAE TDGHDFDAAR AALRRTWQEQ
LGRVEIGGGT LERRKAFYTS LYHSVLHPNL AGDVDGRYTA FGGQVKQAQD FTPHQNFSLW
DTYRPQNQLL ELLEPEVARD VALSVLAAGR DGGWLPRWAL ANSETNIMTG DPVTPFLVEA
WSRGLLKGHE AEAYELLKRN ATSLPPDDSP YNGRSGVEHY LERGYVPSGL EKGVDCPHKG
GDNDCAHPAS ATLEYAAADA ALALMAEGLG QKEDARTFAA RGKWYRNLWD SGTKHFRPRT
QDGTWLAPYD PVEAGRQFHE GGAYQYQWLV PQDPDGLVDL MGGRREAERR LDAFFAHDKL
LADPEGTART EWITQPYDYY GKPTYNPNNE PDLHAPYTYL SVGAPAKTAT VVRAAMTLFT
DGPDGMTGND DLGTMSAWYV FSSLGLYPTM SGAGFFALSS PQFPSATVHI GDKRFAITAP
GASDANRYVQ RVSLNGKDVR KTWLSWDDVA RGGALQHRLG TSPSTWGTSV DARPPSISRG
LPDTRSHLDA SLRPSTAVLP TSAEQRTVPF ALDVLAQSPL VLPVSLTASA PPGWRVPLRP
LVIPSFTLPA QREVEVPVTI PANTPPGTYE VTVTARGPDT TTTKVAVEIR EAAACAASGD
GWCAVDLSTA LNHDGAATVA APGEGDFDGG GWSYDAALLP TGQVVWGGIT YVAPDTSGTA
PNFVEARGQA LLLPEGRYPA LNLVGAAHNG PVGTAVTVRY TDGTSASAPV VVADWAGSGS
AAVLEMPHRI KAGSGVDSPP VRLFGHRVAL DPAKVVQSFV LPADPRVEVF AATLG
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