| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1872 |
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| Symbol | |
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| ID | 8326057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2068096 |
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| End bp | 2071038 |
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| Gene Length | 2943 bp |
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| Protein Length | 980 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942421 |
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| Product | alpha-L-arabinofuranosidase B |
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| Protein accession | YP_003099666 |
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| Protein GI | 256376006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGAT CCCTGTCCCG CGCCCTCTTA GCCCCGCTGG CGGCCCTGCT GGTCGTCGGC
TCGGCCGCCC CGGCGCTCGC CCAACCGGCC GCCCCGGCGC AGTCCGCGGA CGCCGCGCGA
CCGGCCGACG TGGCGCAGCC AGCCGACGTG GCCCAGCCGG CCGCCGCCGC CCAGCCGGCC
GCCGCCGCCC AGCCGGCCGA CGTGGCTCAA CCGGCCGCCG CAGCCCAACC GGCCGCCGCA
GCCCAGTCCG TCGACACCGC CCAGTCCGCC GCCCCCGAGC AGTCCGCCGA CGTGGTGTGG
CAGCCCAAGC CCGCGCCGCT GACCACGCCG TGGACGAGCC AGGTCTCGCC CACCAACGCC
CTGCCCGAGT ACCCGCGCCC CCAGCTGGTC CGGCCGGACT GGCAGAACCT CAACGGGGTG
TGGGAGTTCG CGGGCGCGGC GAACCTGGAC GACCCGCCGA TCGGCCGCCC GCTCGCCGAG
GGCGTCCTGG TGCCCTACGC GATCGAGTCG GCGCTGTCCG GCATCAAGCG GCACGAGGAC
AGCATGTTCT ACCGGCGGAC CTTCACCGTC CCCGCGGGCT GGGACGGGCG GCGGGTCAAG
CTCAACTTCG GCGCCGTCAC CTGGGAGAGC CGGGTCTGGG TCAACGGGAC GCAGGTCGGC
ACGCACACCG GCGGGTTCGA CCCGTTCTCG TTCGACGTCA CCGGCGCGCT CCGCAGTGGT
GGCAACGAGA TCGTGGTCGG GGTCAACTCG CCCGTCGACG GCCAGCGCTA CCCGATCGGC
AAGCAGCGGC GGAACCCGGG CGGCATCTGG TACACGCCCG CGTCCGGGAT CTGGCAGACC
GTGTGGCTGG AACCCGTGGC CACCAACCAC ATCACGCGCC TGGACACCAC GCCCGACGTG
CCCGCCGGGG TGCTGGACCT GGTCGTGCGG GGCAGCGCGG GCCAGCAGGT GCAGGCCCAG
GTGCTCAGCG GCGGGCAGGT CGTCGGCACG GCGTCCGGGA CCGTCGGGCA GCACCTGCGG
GTGCCGGTGC CGAACGCGCG GCTGTGGTCG CCGGACGACC CGTTCCTGTA CGACCTGCGC
GTCACGATGG CGGGCGGCGA CGCGGTCACC GGCTACTTCG GGATGCGCTC GCTCGGCAAG
GCCGTCATCG GCGGCGTGAC CAGGCCGCTG CTGAACGGGG ACTTCGTGTT CCAGCTCGGC
ACCCTGGACC AGGGCTACTG GCCGGACGGG GTCTACACCG CGCCCACCGA CGCGGCGCTG
CGCTCGGACC TGGAGCAGCA GAAGGCGTTG GGCTTCAACA TGGTCCGCAA GCACATCAAG
GTCGAACCGG CCCGCTGGTA CTACTGGGCG GACAGGCTCG GGCTGATGGT GTGGCAGGAC
ATGCCGTCGG TCGACTCGGT GGACGAGGCC CCGAACAGCC ACGCCAACTA CGAGTCCGAG
CTGCGCCGGA TGATCGAGAA CCTCAAGGGG ATCACGTCGA TCGTGCAGTG GGTGCCCTTC
AACGAGGGCT GGGGCGAGTA CGACGCCGGG CGCATCACGG ACCTGGTGCG GTCGCTGGAC
AGCACCAGGT TGATCAACCA CAACTCCGGG TCCAACTGCT GCGTCTCCGA CCCCGACCCC
GGCAACGGGG ACGTGATCGA CGACCACGCC TACCAGATGT CGTCCGGCAC CAGGCAGCCC
GACGGGCGGA TCGCGGTGCT CGGCGAGTAC GGCGGGCTCG GGCGGCGGAT CAGCGGGCAC
GAGTACCAGC CGGGCCAGGG CTTCGCCTAC GGCGACCTGT TCCCCGACGA GAACTCGTTG
ACCAGCCGGT ACGTCACGAT CACCGAGGAG GTCGGGCGGT TCGTGCAGAC GCGCGGGCTG
TCGGCGTCGG TGTACACCGA GCCGTACGAC GTGGAGAACG AGGTCAACGG CTTCCACACC
TACGACCGCC AGGTGCTGAA GATGAACGCG GCGCAGGTGC GGGCGGTCAA CCAGCGGGTC
CTGGCGCGCG CCAGGGGGAC CGAGGTCGGG CGGGACGAGC TGGTCTCGCT CAAGGTCGCC
ACCCCCGGCT TCACCACCCG CTTCCTGCGG CACCAGAACT CCCTCGCCCG CACCGACGTG
CTCACCCCCG GCAGCGGCGA GGGCGCGACC AAGGACGCCA CCTACCGGTT GCGCCCAGGG
CTGGCCGACC CGGCCTGCTA CTCCCTGGAG TCGCGGAACT TCCCCGGCAG CTACCTGCGG
CACGCCTCGT CGCGGGTCCG GCTGGACGCC AACGACGGCA GCGCGCTGTT CGCCGGGGAC
GCGACGTTCT GCGCCCGCGA CGGCTGGGGC GCGACGGCGT TCGAGTCCAA GAACCTGCCC
GGCCACTTCC TGCGGCACTA CAACGAGGGC GTGTACGTCG CCCGCAGCGG CGGCCCGAAC
CCGTGGGACG GCGCGGCGAG CTTCACCCAG GACACCACCT GGAACGTCAC GATCCCGCTG
TGGCGCAGCG GGGTCGACCT GCCCGTCGAC CAGGCGCGCT CGCTCCGGGT GACCACCCCC
GGCTTCACCG ACCGGTTCCT GCGGCACCGG GACGGCCTGG CCCGCACGGA CGTCGTCGGC
TCCGCGAGCG ACGCGACCAC CAAGGCCGAC GCGACGTTCG TGGTGCGGCG CGGGCTGGCC
GACCCGTCCT GCTACTCGTT CGAGTCGCGG AACCTGCCCG GCCGGTTCCT GCGGCACGCC
TCGTACCGGC TGCGCCTGGA CACCAACCCG AACACCGACC TCTTCCGCCG GGACGCCACG
TTCTGCGCCC AGCCGGGCGC CGGCGGCACG CGGCTGGCCT CGGTGAACGA GCTGGGGGCG
AACGTCCGGC ACTACAACGC GGAGGTGTGG GCGGCCAGCG ACGGCGGGGC CCACGCGTAC
GACAACCCGG TCTCGTACGC CCAGGACGTG AGCTGGAGCT TCGACCAGCC CTGGACGCCC
TGA
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| Protein sequence | MRRSLSRALL APLAALLVVG SAAPALAQPA APAQSADAAR PADVAQPADV AQPAAAAQPA
AAAQPADVAQ PAAAAQPAAA AQSVDTAQSA APEQSADVVW QPKPAPLTTP WTSQVSPTNA
LPEYPRPQLV RPDWQNLNGV WEFAGAANLD DPPIGRPLAE GVLVPYAIES ALSGIKRHED
SMFYRRTFTV PAGWDGRRVK LNFGAVTWES RVWVNGTQVG THTGGFDPFS FDVTGALRSG
GNEIVVGVNS PVDGQRYPIG KQRRNPGGIW YTPASGIWQT VWLEPVATNH ITRLDTTPDV
PAGVLDLVVR GSAGQQVQAQ VLSGGQVVGT ASGTVGQHLR VPVPNARLWS PDDPFLYDLR
VTMAGGDAVT GYFGMRSLGK AVIGGVTRPL LNGDFVFQLG TLDQGYWPDG VYTAPTDAAL
RSDLEQQKAL GFNMVRKHIK VEPARWYYWA DRLGLMVWQD MPSVDSVDEA PNSHANYESE
LRRMIENLKG ITSIVQWVPF NEGWGEYDAG RITDLVRSLD STRLINHNSG SNCCVSDPDP
GNGDVIDDHA YQMSSGTRQP DGRIAVLGEY GGLGRRISGH EYQPGQGFAY GDLFPDENSL
TSRYVTITEE VGRFVQTRGL SASVYTEPYD VENEVNGFHT YDRQVLKMNA AQVRAVNQRV
LARARGTEVG RDELVSLKVA TPGFTTRFLR HQNSLARTDV LTPGSGEGAT KDATYRLRPG
LADPACYSLE SRNFPGSYLR HASSRVRLDA NDGSALFAGD ATFCARDGWG ATAFESKNLP
GHFLRHYNEG VYVARSGGPN PWDGAASFTQ DTTWNVTIPL WRSGVDLPVD QARSLRVTTP
GFTDRFLRHR DGLARTDVVG SASDATTKAD ATFVVRRGLA DPSCYSFESR NLPGRFLRHA
SYRLRLDTNP NTDLFRRDAT FCAQPGAGGT RLASVNELGA NVRHYNAEVW AASDGGAHAY
DNPVSYAQDV SWSFDQPWTP
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