| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1866 |
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| Symbol | |
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| ID | 8326051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2059981 |
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| End bp | 2061198 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644942415 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003099660 |
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| Protein GI | 256376000 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0645389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG CCAAACTCGA CCCGCCGGTC GCGCCCGCGG CTCCCGGCGC CCGGAACAAG
TTCTCGATCA ACATCCGCCA GTCCGGCATC TACGTGGCGT TCGCGTTCAT CGTGGTGCTG
TTCTCGGTGC TGACCGACGG TGCGCTGCTC ACGCCCCAGA ACATCTCCAA CATCATCGTC
CAGAACTCCT ACGTGCTGAT CCTCGCGATC GGCATGATCC TGGTGATCAT CGGCGGGCAC
ATCGACCTGT CGGTGGGCTC GGTGGTGGCG GTGACCGGCG CGGTCTGCGC GGTGCTCACC
GTGAAGATGG GGCTGGCCTG GCCGCTGGCG GTGCTCATCA CGCTCCTGGT GGGCGCGATG
ATCGGCGCGG CGCAGGGGTA CTGGATCGCG TACTTCGGCA TCCCCGCGTT CATCGTGACG
CTCGCGGGTA TGCTGGTCTT CCGCGCGCTC AGCATGACCG TCCTGGGCAA CCAGGGCATC
GGCCCCTTCC CGGACCAGAT CCGCACGCTG GCCAACGGCT TCACCGAGGG CTACCTCGGC
AACGTCGCCC TCGGCCCGCT GGGCGGCGCG GACCTGGTGT CCCTGCTGGT CGGCCTCGCC
TGCGTCGCGG CCTACGCGTT CTCGCAGCTG CGCAAGCGCC AGGCGCGCCT GGGCTACAAG
CAGACCGTCG AGCCGATGGG CGTGTTCGTC GCCAAGATCG TCGGCATGGC GGTCATCGTG
CTCGCGGTCG TGGTGCAGCT CGCCCGCTTC CGCAACCTGC CGTGGGTGCT CGTGCTGCTC
GCGGCGCTGG CGCTGGGCTA CTCGCTGCTC GCCAACCGCT CGGTGTTCGG CCGCCACATC
TACGCGATCG GCGGCAACCT CCAGGCGGCG CAGCTGTCCG GCGTGAAGAC CAAGCAGGTC
ACGTTCTGGC TGTTCGTCAA CATGGGCGTC CTGGCCGCGC TCGCCGGCGT CATCTTCGCC
GGTCGGCTCA ACCAGGCCGG TCCGACGGCG GGCAACTCGT TCGAGCTCGA CGCGATCGCG
GCGGCCTTCA TCGGCGGCGC GGCCGTGCAG GGCGGTGTCG GTAAGGTGGT CGGCGCGATC
ACCGGCGGCA TGATCATGGG CGTCATCAAC AACGGCATGT CCCTGATCGG TTCGCCCAGC
GAGCAGGTGA TGCTGGTCAA GGGCCTCGTC CTGCTGGCCG CGGTCGCCTA CGACGTGTGG
ACCAAGCGCC GCTCGTGA
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| Protein sequence | MSTAKLDPPV APAAPGARNK FSINIRQSGI YVAFAFIVVL FSVLTDGALL TPQNISNIIV
QNSYVLILAI GMILVIIGGH IDLSVGSVVA VTGAVCAVLT VKMGLAWPLA VLITLLVGAM
IGAAQGYWIA YFGIPAFIVT LAGMLVFRAL SMTVLGNQGI GPFPDQIRTL ANGFTEGYLG
NVALGPLGGA DLVSLLVGLA CVAAYAFSQL RKRQARLGYK QTVEPMGVFV AKIVGMAVIV
LAVVVQLARF RNLPWVLVLL AALALGYSLL ANRSVFGRHI YAIGGNLQAA QLSGVKTKQV
TFWLFVNMGV LAALAGVIFA GRLNQAGPTA GNSFELDAIA AAFIGGAAVQ GGVGKVVGAI
TGGMIMGVIN NGMSLIGSPS EQVMLVKGLV LLAAVAYDVW TKRRS
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