Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1863 |
Symbol | |
ID | 8326048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2055663 |
End bp | 2057171 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644942412 |
Product | L-arabinose isomerase |
Protein accession | YP_003099657 |
Protein GI | 256375997 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCCG CGGCGACACC CCAGGTCTGG TTCCTCACCG GCTCCCAGCA CCTGTACGGC CCGGAGACCC TGGATCAGGT CGCCGACCAG TCCCTGCAGA TCCAGCGGAT GCTGGCAGAC GCGGGCCGGA TCTCGGCCGA GATCGTCAGC AAGCCCGTGC TCACCGACTC CGGCGCCATC CGCAAGGTGA TGCTGGAGGC GAACGCCGAC CCGAGCTGCA TCGGCGTCAT CGCGTGGATG CACACGTTCT CGCCCGCCAA GATGTGGATC ACCGGGCTGG ACGCGCTGCG CAAGCCGCTG CTGCACCTGC ACACCCAGCT CAACGAGTCC CTGCCGTGGT CGACCATCGA CATGGACTTC ATGAACCTGA ACCAGGCCGC CCACGGCGAC CGCGAGTTCG CGTTCATCCA GACCAGGCTG GGCGTGCCGC GCAAGACCGT CGTCGGCCAC GCCACCGACC CGCGCGTGCT CGGCCGGGTC GACGCGTGGG TGCGGGCGGC CACGGGCCAC AACACCCTGC GGAACCTGCG CCTGGCGCGC TTCGGCGACA ACATGCGCGA CGTCGCGGTC ACCGAGGGTG ACAAGGTCGA GGCCGAGCTG CGCTTCGGCG TCTCGGTCAA CACCTACGGC GTCAACGACC TGGTGGCCGT GGTCGACGCG GTCGGCGAGG ACGAGATCGA CTCGCTGGTC GCCGACTACG CCGAGCTGTA CCGGCTGGCG CCCGAGCTGG CCAAGGGCGG CGACCGGCAC GACTCGCTGC GCTACGCGGC CCGCGTCGAG GCCGGGATGC GCCGCTTCCT GGTCGACGGC GGCTTCGGCG CGTTCACCAC GAACTTCGAG GACCTCGGCG GGCTCCGGCA GCTGCCGGGC CTGGCGGTCC AGCGCCTGAT GGCCGACGGC TACGGCTTCG GCGGCGAGGG CGACTGGAAG ACCTCGGTGC TGCTCACGGC GATCAAGGCC ATGGGCGAGG GCACCGGCAA GGGCACCTCC TTCATGGAGG ACTACACCTA CCACCTGGTG CCCGGCGAGG AGAAGATCCT CGGCGCGCAC ATGCTGGAGG TGTGCCCGAC CATCGCGAAG GACACCCCGT CCTGCGAGAT CCACCCGCTC GGCATCGGCG GGCGCGAGGA CCCGGTCCGC CTGGTCTTCG ACGCCGTCGA GGGCCCGGCC ACCGTGATCG GCATGTCCGA CCTCGGCGAC CGCTTCCGCC TGGTGGCCAA CGACATCGAC GTCGTGGCCC CGGACGAGCC CCTGCCCGCC CTGCCGGTGG CGCGCGCGGT CTGGAAGCCC GCGCCGTCGC TGGCCGTGTC CGCCGAGTCC TGGCTGACCG CGGGCGGGCC GCACCACACC GTGCTGACGC AGGCCGTCGG CTCCGAGGTC CTGCGGGACT TCGCCCAGAT GTCGGAAACC GAACTGGTGC TGATCGATCA GGACACCACC ACGGAGCAGT TCGCGGACCG GCTCCGCTGG AACCAGGCGT ACTACCGCCT GGCGCAGGGG CTCCGCTAA
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Protein sequence | MPAAATPQVW FLTGSQHLYG PETLDQVADQ SLQIQRMLAD AGRISAEIVS KPVLTDSGAI RKVMLEANAD PSCIGVIAWM HTFSPAKMWI TGLDALRKPL LHLHTQLNES LPWSTIDMDF MNLNQAAHGD REFAFIQTRL GVPRKTVVGH ATDPRVLGRV DAWVRAATGH NTLRNLRLAR FGDNMRDVAV TEGDKVEAEL RFGVSVNTYG VNDLVAVVDA VGEDEIDSLV ADYAELYRLA PELAKGGDRH DSLRYAARVE AGMRRFLVDG GFGAFTTNFE DLGGLRQLPG LAVQRLMADG YGFGGEGDWK TSVLLTAIKA MGEGTGKGTS FMEDYTYHLV PGEEKILGAH MLEVCPTIAK DTPSCEIHPL GIGGREDPVR LVFDAVEGPA TVIGMSDLGD RFRLVANDID VVAPDEPLPA LPVARAVWKP APSLAVSAES WLTAGGPHHT VLTQAVGSEV LRDFAQMSET ELVLIDQDTT TEQFADRLRW NQAYYRLAQG LR
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