Gene Amir_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1859 
Symbol 
ID8326044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2049583 
End bp2051793 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content73% 
IMG OID644942408 
Productprotein of unknown function DUF1680 
Protein accessionYP_003099653 
Protein GI256375993 
COG category[S] Function unknown 
COG ID[COG3533] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGGG TGCCGTTACC GAGGAGGGGT TTCCTGCTCG CGGGAGGCCT CGCGGCGACG 
GCCCCGCTGG TGGGCGCGGG GGTGGCCTCG GCCGCCCCCG CGGCCCCCGC CGGGGGTTCC
ACCGACGCCG CCGCCGGGAG TGCCGCGACC GGGAGCGCCG CCGGGGACTC GTTGCCCCTC
AACGCCTTCC GGCTCGACCA GGTCGCGCTG CACGACAGCC GCGCCGCCCT CGACGCGCCG
CCGCGAACCC CCGCCGCGCG GGGGAAGTTC GGCGGCGCGG CCCTGCACCA GCGCGGCTGC
CACCAGTACG TGGAGCTGCC CGCGCTGCCC ACCGGCCGGT TCACCTTCGC CGCCTGGGGC
AAGCCCACCC ACGCCTCCAC CTGGGCGCGC GTGCTCGACT TCGGCGACGA CGACACCCGC
TACCTGTACC TGGCCGCCCG CAACGGGAAC GGCGTGCCGC GCTTCGCGAT CACCGCCACC
GGCCCCGGAG GCGAGCAGGG CGTCGACGCG CCGACCCCGC TGCCTGCGGG GGAGTGGAGC
CACCTCGCGC TGAGCGACGG CGACGGCGAC GGCGACGGCG ACGCCGACGG CGCGGCCACC
CTCTACGTCA ACGGCGCGGC CGTCGGCAGC ACCGCCGTCA CCACCCCGCT CACGGGCCTC
GCGCACCACT GGCTCGGCCG CTCGCACTTC GCCGCCGACC CGGTCTTCGC GGGCGCGTTC
GACGAGATCA GCGTGTGGTC GCGGGTCCTC ACGCCCGACG AGGTCGCCGC CGCCGCGACC
AGGCCCGCTG GCGGCGACGT CGCCGCGCAC CCGTGCGACG AGGCCGGACC GGCGCTGCGC
GACCTGCGCG CCCGCACCGG CAAGCCCGAG CACCTCGCGC CGGCGCGGAT GTTCGACCTC
GACGCGCTCA TCGACGCGTG CGCCGAGAAC CGGGACGTGC TCGCCGGGCT GCACGCCAAC
CAGCACATCC CGATCTTCAC CGGCCTGGTC CGGCTGCGCG AGGCCACCGG AGAGCAGCGC
TACCTCGACG CGGCGCGGAA CTTCTGGGAC ATGGTCGTGC CGCGCAGGCT CTACCGGATC
GGCGGCACCA GCACCGGTGA GTTCTGGCGC GCGCCCGGTG TGATCGCGGA AACCCTGGCG
GACGACAACG CCGAGACCTG CTGCGCGCAC AACATGCTCA AGCTCGGCCG CGCGCTGTTC
AACCAGATCC TCGGCTCCAA GCAGGACGCG CCGAGCGCGG ACGTCCCGCT GATGACCTAC
TTCATCGGAC TCGCCCCCGG ATCGGTGCGG GACTTCACGC CCGAGCAGGG CGCCACGTGC
TGCGAGGGAA CGGGACTGGA GAGCGCCGCC AAGTACCAGG ACTCGGTCTA CTTCCACGAC
GAGAAAACGT TGTACGTCAA CCTTTTCGCG CCGACAACCG CGCACTGGAA CGAAACGACG
ATCACCCGTG GCGCCCATTT TCCCCACGAG CGGGGGACTT CGCCCGGAAT CGGCGGGAAG
GGCGGCCGGG TCACGATCAA GGTGCGGGTG CCGTCGTGGG CGCGCGGGGC CTCCGCCTCG
CTCAACGGGC GACCGCTCGC GGTCCCCGCG GCGGGCCCTA CCTGGTGGTG GCGCGCGACT
GGCGGCGCGG TGACGTGCTG CGACTGCGCA CGCCGTGCCA CCTGGTGGCC GAACCGACCC
CGGACCGGCC GGAGGTCCAG GCGCTCGGCT ACGGGCCGGT GCGCCTGGTC GCCCGCGACC
CGCGCGCCGA ATTCCTGGAA CTCGCGCTGC ACCCGCACGC GACCCCGTCC GGCGACCTCT
CCCGCGCGCT CCGCCCGATT TCCGGGAAAC CGCTGCACTT CACGCTCGGC GGGATCGAGT
TCGCGCCGTT CCACGAGGGC ACGACCGACC CGTTCCACTC CCACTTCCGC CGGGTGGAAC
CGACGATCGC GTTCGGCGGC GTCGATTCAG GGGCGCCGAA CGAGGGCGGT TTCCTTGACC
GGGTCCGGGA AGCCGCGCCA TTCCGCGACC GGGCGTCGTT CCTGCGGCAC GTCCACCGGC
TCACCGCGGA CCACCCCGAG CGGGCGCGCA TCCGCGACGC GGCGGCGAGC GGCCGAATGT
CGGAACACGA TGTCCGAACG GTGGACAATG GACGGTGACG ACTCCTACGG TGGTAGACCA
TTGTTATCGC TAACACTTGT GGCTTCCCGG CCGATTGGCC GCAGTGCTTG A
 
Protein sequence
MIRVPLPRRG FLLAGGLAAT APLVGAGVAS AAPAAPAGGS TDAAAGSAAT GSAAGDSLPL 
NAFRLDQVAL HDSRAALDAP PRTPAARGKF GGAALHQRGC HQYVELPALP TGRFTFAAWG
KPTHASTWAR VLDFGDDDTR YLYLAARNGN GVPRFAITAT GPGGEQGVDA PTPLPAGEWS
HLALSDGDGD GDGDADGAAT LYVNGAAVGS TAVTTPLTGL AHHWLGRSHF AADPVFAGAF
DEISVWSRVL TPDEVAAAAT RPAGGDVAAH PCDEAGPALR DLRARTGKPE HLAPARMFDL
DALIDACAEN RDVLAGLHAN QHIPIFTGLV RLREATGEQR YLDAARNFWD MVVPRRLYRI
GGTSTGEFWR APGVIAETLA DDNAETCCAH NMLKLGRALF NQILGSKQDA PSADVPLMTY
FIGLAPGSVR DFTPEQGATC CEGTGLESAA KYQDSVYFHD EKTLYVNLFA PTTAHWNETT
ITRGAHFPHE RGTSPGIGGK GGRVTIKVRV PSWARGASAS LNGRPLAVPA AGPTWWWRAT
GGAVTCCDCA RRATWWPNRP RTGRRSRRSA TGRCAWSPAT RAPNSWNSRC TRTRPRPATS
PARSARFPGN RCTSRSAGSS SRRSTRARPT RSTPTSAGWN RRSRSAASIQ GRRTRAVSLT
GSGKPRHSAT GRRSCGTSTG SPRTTPSGRA SATRRRAAEC RNTMSERWTM DGDDSYGGRP
LLSLTLVASR PIGRSA