Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1858 |
Symbol | |
ID | 8326043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2048069 |
End bp | 2049586 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942407 |
Product | Alpha-N-arabinofuranosidase |
Protein accession | YP_003099652 |
Protein GI | 256375992 |
COG category | [R] General function prediction only |
COG ID | [COG3940] Predicted beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACGC TCGACCGCAG GTCACTGCTG CGCGCCGGAG GGGCGCTCGC CGCCGCGAGC ACGCTCCCCG CGCTCGGCGC CACCACCGCG TCGGCCCAGG AGCCGGCGAG AACCGCTGCC GCGCAGGGGG TCTCGGCGCA GGCCGTCCCC GGCCAGGCGG CCATCGACGT CACGCCCGCG CTCCCCACCC GCAGCCCGCT GGTCGAGCAG CGCGCCGACC CGTTCGTCAC CCCGCCCACC GACGGCATGT ACTACCTGAC CGGCTCGGTC CCGGAGTACG ACCGCATCGT CATCCGGGGC GCGTCCACCC TCGACGGCCT GACGACCGCC CGCGAGCGCA CCATCTGGCG GCGGCCGACC TCCGGCAAGC TGGGCGGCTA CATCTGGGCG CCGGAGCTGC ACCGCATCGA CGGCAAGTGG TACGTCTACT TCGCCGCGGG CGACTCGGAC GAGCCGTTCC GCATCCGCAC CTACGTCCTC GAATCGGCCA ACGCCGACCC GCGCGCCGAC GGCTGGGTGC TGCGCGGGCA GGTGACCACC GCCTGGGACA CCTTCACCCT GGACGCCACC ACGTTCGAGC ACCGGGGCAA GCGGTACTTC CTGTGGGCGC AGAGCGAACC GGGCATCGCC ACCAACAGCA ACCTCTACAT CGCCGAGATG GCCTCCCCGC TCGCCCTCAA GTCCGCGCCG GTCCGGATCG CCGTCCCCAC GCTGAGCTGG GAGATCCAGG GCTTCAAGGT GAACGAGGGC GCCGCGGTGC TGATCCGCAA CGGCCGGGTG TTCGTCACCT ACTCGGCCAG CGCCACCGAC TCCCGCTACT GCATGGGCCT GCTCACCGCC GACGAGAACG CGAACCTGCT CGACGCGCGC TCGTGGACCA AGTCGCAGAC CCCGATCTTC ACCACCAACA CCGAGACCGG CCAGTACGGG CCCGGCCACA ACTCGTTCAC CACGGTCGAC GGCGCGGACG TCATGGTCTA CCACGCCCGC GACTACCGGG ACATCACCGG CGACCCGCTG TTCGACCCGA ACCGGCACGC CCGCGTGCAG CGGGTGCACT GGAACGACGA CGGCACCCCG TCGTTCGGCG TCCCGGTCGG CAAGGGCGGC CCCATCAGCC GCCTGTCGCC GCTCGACGCG CCGACCCTGT TCGTGCGGCA CTACGACTAC AAGCTGCGGG TGGACGGCAA CGTGCGCACC GTCGCCGACT CGCAGTTCCG CTTCGTGCCG GGCTTCTTCG GCGCGGGCAC GGTCGCGCTC CAGTCGGTCA ACTACCCCAA CCGGTACGCG CGGGTGGTCG ACGGCGTGAC CATCCGAGTC GACCCGTACG AGGACAGCGA CGCCTACGGG CGCGCGGCCA GCTTCGTCCG GGTCGAGGGG CTCGCCGACA AGACGGCGGT GTCGCTGCGC CCGCACGACA GCAGGACCGG GTACCTGTCG CACGACAGCG GCAGGCTCGT CGTGGCCGAG CCGGGCAGCT CCGACGCGCG CAAGCGCGCG ACGTTCAAGG TCGGGTGA
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Protein sequence | MSTLDRRSLL RAGGALAAAS TLPALGATTA SAQEPARTAA AQGVSAQAVP GQAAIDVTPA LPTRSPLVEQ RADPFVTPPT DGMYYLTGSV PEYDRIVIRG ASTLDGLTTA RERTIWRRPT SGKLGGYIWA PELHRIDGKW YVYFAAGDSD EPFRIRTYVL ESANADPRAD GWVLRGQVTT AWDTFTLDAT TFEHRGKRYF LWAQSEPGIA TNSNLYIAEM ASPLALKSAP VRIAVPTLSW EIQGFKVNEG AAVLIRNGRV FVTYSASATD SRYCMGLLTA DENANLLDAR SWTKSQTPIF TTNTETGQYG PGHNSFTTVD GADVMVYHAR DYRDITGDPL FDPNRHARVQ RVHWNDDGTP SFGVPVGKGG PISRLSPLDA PTLFVRHYDY KLRVDGNVRT VADSQFRFVP GFFGAGTVAL QSVNYPNRYA RVVDGVTIRV DPYEDSDAYG RAASFVRVEG LADKTAVSLR PHDSRTGYLS HDSGRLVVAE PGSSDARKRA TFKVG
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