Gene Amir_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1847 
Symbol 
ID8326032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp2032721 
End bp2033869 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content73% 
IMG OID644942396 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003099641 
Protein GI256375981 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.232727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAGC GGGTCGAGGT GTCGGTGTTC ACGACCACCG CGCGCACCGA GGTGGATCCG 
GCCGGGCACC GGCACCCCGG CCCGGCGCAC GAGGTGCGCG AGGCGCTGCT GGAGGTCCAC
GCGGGCGGCG CGGTCGGCCG GGTGCAGGTG CACCCCGACC AGCTGCGGCC CGCCGTGCTC
GACGGCATCG TGCGACCCGT CCTGCTCGGC CAGGACCCGT GGGACCGCGA GCGGCTCTGG
AAGTCCCTGG CGCGCAAGCA GCGCGGCTCG CACGGCCGGT TCACCGACCG CGCCCTCGGC
TACGTCGACA CCGCGCTGTG GGACCTGGTC GGCCGACTCT CCGGGATGCC GGTGTGGAAG
CTGCTCGGCG GCGCCAGGGA GAAGATCCCG GCCTACGCCA GCACCATGTG CGGTGACCGA
ACCCCCGGCG GCCTGAGCAC GCCCGGCGAC TACGCCGAGT TCGCCAAGCA GCTCGTGGAG
ACCGGCTACG GGGCGATCAA GCTGCACACC TGGATGCCGC CGGTGCCCGG CGCGCCCAGC
GTGCGGATGG ACATCGCCGC GTGCGAGGCG GTGCGGGACG CGGTCGGCCC CGACATCGCG
CTCATGCTCG ACGCCAACCA CTGGTACTCG CGCACCGAGG CCCTCGAACT CGGACGGGCC
TTGGAGCAGC TGGACTTCTA CTGGTTCGAG GAGCCCATGG AGGAGGCCTC GGCGGCCTCC
TACCGCTGGC TCGCCGACCA GCTCTCGATC CCGGTGATCG GGCCCGAGGT GGCCTGGGGC
AAGTTCCACA CCAGGGCCGA GTGGATCACC TCCGGGGCGT GCGACATCCT GCGCGCGGGC
CCCACCGACG TCGGTGGCAT CTCCGCCACC GTCAAGACCG CGCACCTGGC CGAGTCGTTC
AACGTGGACT GCGAGATCCA CGGCGACGGG AGCGCGAGCC TGGCCGTGCT GGGCGGCACC
GACGTGGGCC GCTGGTACGA GCGCGGGCTC CTGCACCCGC ACCACGACTT CGACCGCGTG
CCGCCGCACC GGCTCACGAT CGCCGACCCC CTCGACGAAG CGGGGTGCGT CGCCATGCCC
ACCGGGCCCG GCCTCGGCGA TCAGTGGGAC ATCGAGCACA TCCGTGCTCA CACCGAGGAG
AGGTGGTGA
 
Protein sequence
MIERVEVSVF TTTARTEVDP AGHRHPGPAH EVREALLEVH AGGAVGRVQV HPDQLRPAVL 
DGIVRPVLLG QDPWDRERLW KSLARKQRGS HGRFTDRALG YVDTALWDLV GRLSGMPVWK
LLGGAREKIP AYASTMCGDR TPGGLSTPGD YAEFAKQLVE TGYGAIKLHT WMPPVPGAPS
VRMDIAACEA VRDAVGPDIA LMLDANHWYS RTEALELGRA LEQLDFYWFE EPMEEASAAS
YRWLADQLSI PVIGPEVAWG KFHTRAEWIT SGACDILRAG PTDVGGISAT VKTAHLAESF
NVDCEIHGDG SASLAVLGGT DVGRWYERGL LHPHHDFDRV PPHRLTIADP LDEAGCVAMP
TGPGLGDQWD IEHIRAHTEE RW