Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1840 |
Symbol | |
ID | 8326025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 2023192 |
End bp | 2025039 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942389 |
Product | Alkaline phosphatase |
Protein accession | YP_003099634 |
Protein GI | 256375974 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1785] Alkaline phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGAG TGCTCAAGCG CACTCGGAAG CTCGCCGTCA CCGGCACGGC CCTGGGCGTC GCGTTCGCCT CGGTGCCCGT CGGTGTCGCG TCGGCCGCGG AGACCACCGC GCCGAAGAAC GTCATCGTGC TCATCTCGGA CGGCGCGGGC TACAACCAGT TCGACGCCGC CAGCCTGTAC GAGCACGGGC AGAGCCTCAA CCAGGTCGCG GTGGACCCCG CGACCGGAGC CGTGCAGCGC GTCCCCGGCG TGCCCAGCCA GGTCTACGAG CACTTCCCCG TGAAGGTCTC GCAGAGCCAC TACTCGGCGA ACGGGCGCGC CGCCTACACC CCCGAGCAGG CCTGGGGCTC GTTCGACTGG GTCGCCTCCG GCGCGACCGA CTCCGCCGCC GCGGCCACCG CGCTCGGCAC CGGCGTCAAG ACCAACAACG GCGTCATCGG CTTCGACCCG GCGGGGCAGA AGCTGCTGAC CGTGGGCGAG CAGGCCAAGA AGGTCGGCAA GAAGGTCGGC GTCGTCACCT CGGTGCCGTT CAACCACGCC ACCCCGGCGG GCTTCATCGC CCACAACGCC GACCGCAACG ACTACCAGGG CCTCGCGACC GAGATGATCG ACAGCGGCGC CGACGTCATC ATGGGCGGCG GGCACCCGAA CTACACCGAC GCGCACACCA GCCGCGCGTC CAACTGGACC TGGATCTCGC AGAACGACTT CCAGCGCGTC AGCACCGGTG GCACCGACTT CTCCTACGTC GAGACCCGCT CCGGTTTCGA GGCGCTGGCC ACCGCGACCG AGGTCCCGGA GAAGGTCTTC GGCCTGGCGC AGGTCGCCGA GACCCTCCAG TACAACCGGC CGGGCCTGGG CAACACCAGG GTCAAGCCCG GTACCGACGC CCGCAACGAC GTCGCGTCGC TCGACGTGAT GGCCAAGGGC GCGCTGAACG TCCTGGAGAA GGACGAGGAC GGCTTCTTCC TCATGGTCGA GGGCGGCGCC GTCGACTGGG CAGGCCACGC CAACCAGACC ACGCGCCTGG TGGAGGAGCA GGTCGAGTTC AACCGCTCCG TCGAGGCCGT CACCGACTGG GTCGAGCGCA ACAGCAGCTG GGACGAGACC CTGGTCGTCG TCACCGCCGA CCACGAGACC GGCTACCTCG CGGGCCCCGG CTCCAAGCCG ACCTGGACCC CGATGACCGG GGCCAAGGGC GAGCTGCCCC AGGTGTCGTG GCACTCCGGT GGCCACACCA ACGCGCTGGT TCCCTTCTAC GCCAAGGGCG CCGGCTCGGA CGTGCTGAAC GCGCGCGCCG ACAAGTGGGA CACCGTGCGC GGCGCGTACC TGGACAACAC CGCCGTCGGC GAGACCGTGT TCGACCTGCT GGGCCACGCC CCGGCCTCGG CCGACTCGGC CGTCGCGCTG GAGGCATCCG TGCCGCTGCC CAGCACCGCC GGTGACCTGA GCATGACCGT CGCCGACAGC GGCGCCGTCC GGTTCACCGG CGAGCGCACC CGGACCGGCG CGCTGCCGCA GGTCACCGTG ACCGACACCC GCAACGAGGT GCAGGCGCGC GGCCAGGGCT GGACCGTCTC CGGCGCCGCC GGTGAGTTCG TGGCGGGCAA CCGGAAGTTC GGCGCCGAGA ACCTGGGCTG GACCCCGAAG GTCGTCAGCT CCGACTCGAA CGCCGCCGCC GGTCCGCAGG CCGTCCTGGA CGCGCCCGCC GCGCTGGCCG ACACCAACCG CGTCAGCCGC TACGGCACCA CCGTCGTGGG CGCCGACCTC GGCCTGACCG TGCCGGACGA GGCCCGCAGC GGTCGCTACG GCAGCGAGAT CACCCTGACG CTGTTCGCCA AGGACTGA
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Protein sequence | MGGVLKRTRK LAVTGTALGV AFASVPVGVA SAAETTAPKN VIVLISDGAG YNQFDAASLY EHGQSLNQVA VDPATGAVQR VPGVPSQVYE HFPVKVSQSH YSANGRAAYT PEQAWGSFDW VASGATDSAA AATALGTGVK TNNGVIGFDP AGQKLLTVGE QAKKVGKKVG VVTSVPFNHA TPAGFIAHNA DRNDYQGLAT EMIDSGADVI MGGGHPNYTD AHTSRASNWT WISQNDFQRV STGGTDFSYV ETRSGFEALA TATEVPEKVF GLAQVAETLQ YNRPGLGNTR VKPGTDARND VASLDVMAKG ALNVLEKDED GFFLMVEGGA VDWAGHANQT TRLVEEQVEF NRSVEAVTDW VERNSSWDET LVVVTADHET GYLAGPGSKP TWTPMTGAKG ELPQVSWHSG GHTNALVPFY AKGAGSDVLN ARADKWDTVR GAYLDNTAVG ETVFDLLGHA PASADSAVAL EASVPLPSTA GDLSMTVADS GAVRFTGERT RTGALPQVTV TDTRNEVQAR GQGWTVSGAA GEFVAGNRKF GAENLGWTPK VVSSDSNAAA GPQAVLDAPA ALADTNRVSR YGTTVVGADL GLTVPDEARS GRYGSEITLT LFAKD
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