| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1833 |
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| Symbol | |
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| ID | 8326018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 2016750 |
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| End bp | 2017862 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644942382 |
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| Product | putative RNA polymerase, sigma 70 family subunit |
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| Protein accession | YP_003099627 |
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| Protein GI | 256375967 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCGGG TCCTCGGGGC GCTGGTGCGG CGCGGGGCGG ACTTCGGGGA CGCCGAGGAC
GCCGTTCAGG AGGCGCTGGT CAAGGCGCTC GCGCTGGAGC GCCCGCCGGA CGACCTGCGG
GCGTGGCTGA TCGTGGTGGC GGCCCGCAAG CTCGTGGACC GGGCGCGCGG CGACCGGGCC
AGGCGCAGGC GCGAGGAGGC GTTCGCCGAA CCGCCGCCCG AGGTCGCGGA CCGGGACGAC
ACCCTCCTGC TGCTGTTCCT GTGCTGCCAC CCGGACCTGC CGCCCGCGTC GGCGATCGCG
CTGACCCTGC GGGCCGTGGC CGGGCTGACC ACGGCGGCGA TCGCCGAGGC CCACCTGGTG
CCGGAGGCGA CGGTGGCGCA GCGGATCAGC CGGGCGAAGC GCCGCGTCCG GGTGGAGCCG
CTGGGGGACG CCGAGGCGCG GCTGCCGCAG GTGCTGCGCG TGCTGTACCT GCTGTTCAAC
GAGGGCTACA CGCATCCCGG CCGGGTCGAC CTGGCCGAGG AGGCGATCCG CCTGGCGCGC
GCCGTCCACG CGGCGCGACC GGACGACGGC GAGGTGGCGG GCCTGCTGGC CCTGATGCTC
CTGACCCACG CCCGGCGCCC GGCGCGGCTC GGCGAGCACG GCGCGCTCGT CCCGCTGGCC
GAGCAGGACC GGGGGCTGTG GGACGAGGCG CTGATCGAGG AAGGGGCGGA CCTGGTCGTG
CGGGCGGTGT CGCGCGGCCG GGTGGGGGAG TACCAGTTGC AGGCGGCCAT CGCGGCGATC
CACGACGACG CCGCGCGCGC CGAGGACACC GACTGGCCGC AGATCCTCGC CATGTACGGG
CTGCTGGTGC GGATGACCGG CAACCCGGTG ATCGCGCTGA ACCGGGCCGT GGCGGCGTCG
GTGGTGCACG GGCCCGAGGC CGGGTTCACG CTGGTCGCGG AGCTGGAGGG GGAGCTGGCG
GGGCACCACC GGCTGGACGC GGTGAAGGCG CACCTGCACG AGCGGTCGGG CGACGTGGAG
GCCGCGGTCC GGCACTACCG GGCCGCCGCG GCGCGGACGA CCAGCGCGGC CGAGCGGCAG
CACCTGCTCG CGAGAGCGGC CCGGTTGAGC TGA
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| Protein sequence | MPRVLGALVR RGADFGDAED AVQEALVKAL ALERPPDDLR AWLIVVAARK LVDRARGDRA
RRRREEAFAE PPPEVADRDD TLLLLFLCCH PDLPPASAIA LTLRAVAGLT TAAIAEAHLV
PEATVAQRIS RAKRRVRVEP LGDAEARLPQ VLRVLYLLFN EGYTHPGRVD LAEEAIRLAR
AVHAARPDDG EVAGLLALML LTHARRPARL GEHGALVPLA EQDRGLWDEA LIEEGADLVV
RAVSRGRVGE YQLQAAIAAI HDDAARAEDT DWPQILAMYG LLVRMTGNPV IALNRAVAAS
VVHGPEAGFT LVAELEGELA GHHRLDAVKA HLHERSGDVE AAVRHYRAAA ARTTSAAERQ
HLLARAARLS
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