Gene Amir_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1811 
Symbol 
ID8325996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1993794 
End bp1995122 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content76% 
IMG OID644942360 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003099605 
Protein GI256375945 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGC CGAAGGTGCT CGTCGTCGGG ACCGGGTTCG CCGGGTTCCA CGCGCTCAAG 
TCGCTGGAGA AGGCGCTGCC GCGCGACGCC GCCGAGCTGA TCGCGGTCAA CCCGACCGAC
TACACCCTGT ACGTCCCGCT GCTGCCCGAG GTCGCGGGCG GCTCGCTCGA CCCCCGGCGG
GTCGCGGTGC CGCTGCGCTC CACCCTCAAG CGGACCCGGC TGGTGCTGGG CACCGCCACC
GGCATCGACC CCGAGGCGCG CACCTGCTCG GTCGTGGACG TGGAGGGGCG CGGGCGGGTG
CTGGAGTGGG ACCGGCTGAT CGTGACGGCG GGCAGCGTGA CGCGGATGCT GTCCGTCCCC
GGCGTCGGCG AGCACGCGCT CGGGTTCAAG TCGGTGCCCG AGGCGCTGTA CCTGCGCGAC
CACGTGCTGC GGCAGGTCGA GCTGGCCGAG CAGAGCGACG ACCCGGCCGA GCGGGCGGCG
CGCGCCACGT TCGTGGTGGT CGGCGCCGGG TACACCGGCA CCGAGCTGGT CGCGCAGGGG
CAGCGGATGA CCGCCGAGGC CCTGCGCGCC CGGCGCGGGG CTCCGGGGGC GCTGCGGCCG
GACGAGTGCC GGTGGTTGCT GCTGGACATG GCCGACCGGG TGCTGCCGGG GCTGGACCCG
CGCATGTCCG GGCCCGCGCG GAAGGTCCTC GAGTCGCGCG GGGTGGACGT GCGGATGAAG
ACGAGCGTCG CCGAGGTCAC CGACACCTGC GCGCGGCTCA CCGACGGCTC CGAGATCCCC
ACCCGCACCG TCGTGTGGTG CGTGGGCGTG CGGCCGGACC CGCTGGTGCA GGCGTCCGGG
CTGCCGGAGG AGCGCGGGCG GGTCGTGGTG GACACCTCGC TGGCGGTGCG CGGGCTGGAC
GGGGTGTACG CGGCGGGCGA CCTGGCCGCC GTGCCCGATC ACTACAACCG GGGGAAGCCG
ACGCCGATGA CCGCGCAGCA CGCGCAGCGG CAGGGCGCGC TGGCCGGGCG GAACGTCGCC
GCCTCGCTCG GGCACGGGCA GGTGAAGCGG TACAAGCACC GCGACCTGGG GTTCGTGGTC
GACCTGGCCG GGATGGACGC GGTGGCCGAC CCGCTGCGCG TGCCGCTGAG CGGGGTGCCC
GCGAAGATCG TGGCGCGCGG CTACCACCTG CTGGCGATGC CGGGGAACCG GGTGCGGGTG
GCCGCCGAGT GGATCGCCGA CCTGCTGTCC GGGCGGCAGG TGGTGCAGTT CGGGCTGGTG
CCGCGCGAGG GCGTGCGCCT GTCGGACGCG GACCGGCCGG GGAACCGGGT GGTCAAGGCC
GGGAGCTGA
 
Protein sequence
MAKPKVLVVG TGFAGFHALK SLEKALPRDA AELIAVNPTD YTLYVPLLPE VAGGSLDPRR 
VAVPLRSTLK RTRLVLGTAT GIDPEARTCS VVDVEGRGRV LEWDRLIVTA GSVTRMLSVP
GVGEHALGFK SVPEALYLRD HVLRQVELAE QSDDPAERAA RATFVVVGAG YTGTELVAQG
QRMTAEALRA RRGAPGALRP DECRWLLLDM ADRVLPGLDP RMSGPARKVL ESRGVDVRMK
TSVAEVTDTC ARLTDGSEIP TRTVVWCVGV RPDPLVQASG LPEERGRVVV DTSLAVRGLD
GVYAAGDLAA VPDHYNRGKP TPMTAQHAQR QGALAGRNVA ASLGHGQVKR YKHRDLGFVV
DLAGMDAVAD PLRVPLSGVP AKIVARGYHL LAMPGNRVRV AAEWIADLLS GRQVVQFGLV
PREGVRLSDA DRPGNRVVKA GS