Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1802 |
Symbol | |
ID | 8325987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1981969 |
End bp | 1982829 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644942351 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003099596 |
Protein GI | 256375936 |
COG category | [S] Function unknown |
COG ID | [COG3708] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGAAC GGCTCAACGA GGCCATGGAC CGCATCGAGG AGGCCCTGCC GGGCGAGGTC GACGTCGCGG AGCTGGCGCG GATCGCGCTG ACCTCCGAGC ACCACCTGCG GCGGATGTTC TCGGCGCTGG CCGGGATGCC GCTGTCGGAG TACGTGCGGC GGCGCAGGCT CACGCTCGCG GCGGCGGAGG TGGTGGCGGG GGAGCGCACC CTGCTGGACA TCGCCGTCGA CCACGGCTAC GCCTCCAACG AGGCGTTCAC CAGGGCTTTC CGCGCCGTGC ACGGCGTGGG GCCCGGTGCG GTCAGGCGGA CCGGGGCGGC GCTCAGCTCG CAGTCGAGGA TGGCCTTCCG CCTCGTCATC GAGGGGAGCA GCGACATGCG GTACCGGATC GTGGAACGGG CGGAGTTCGC CGTCGTCGGG CGCAAGGCCA GGGTGCCCCT GGTCCACAAG GGGATGAACC CGCACATCGC GGACTTCATC AAGGGGCTCG ACAAGGCGGA GTTCGCCGAG ATCAAGAAGC TCAACAACGA GGAGCCGAGC GGGGTCGTCG GGGTCAGCGC CGACCTGGAC CCGTCCCGCG CGGAGGGCAC CGAGCTGGAC TACTACCACG GGGTGGCCAG CTCGCTGCCG GTCCCGGAGG GGCTGGACGC GCTCCCGGTG GCCGCCGGGA CGTGGGCGGT GTTCTCCAGC ACCGGGGAGT TCCCGAGGGC GCTGCAGGAG ATGTGGCGGG ACGTGTTCAC CCAGTGGTTC CCGTCGAACC CGTACCGCAG CCGCCCCGGC CCGGAGATCC TCAGCAGCAC CGTGTTCGAC GACGGGAAGA CGGCTGAGGC CGAGCTGTGG ATTCCTGTGG AGAAGGAGTA G
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Protein sequence | MLERLNEAMD RIEEALPGEV DVAELARIAL TSEHHLRRMF SALAGMPLSE YVRRRRLTLA AAEVVAGERT LLDIAVDHGY ASNEAFTRAF RAVHGVGPGA VRRTGAALSS QSRMAFRLVI EGSSDMRYRI VERAEFAVVG RKARVPLVHK GMNPHIADFI KGLDKAEFAE IKKLNNEEPS GVVGVSADLD PSRAEGTELD YYHGVASSLP VPEGLDALPV AAGTWAVFSS TGEFPRALQE MWRDVFTQWF PSNPYRSRPG PEILSSTVFD DGKTAEAELW IPVEKE
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