Gene Amir_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1801 
Symbol 
ID8325986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1981090 
End bp1981707 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID644942350 
Productcyclase/dehydrase 
Protein accessionYP_003099595 
Protein GI256375935 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACGA TCGAGAAGTC CGTGGACGTC GAGGTCCCGG TCAGCACCGC GTACAACCAG 
TGGACCCAGT TCGAGTCGTT CCCCCGGTTC ATGGAGGGCG TCGAGAACAT CACCCAGGTG 
TCGGACACCC GGACCCACTG GGTCACCAGC ATCGGTGGCG TGAAGCGCGA GTTCGACGCG 
GAGATCACCG AGCAGCACCC GGACGAGCGG GTCGCCTGGC ACACGGTGGA GGGTCCGCAG 
CAGGCCGGTG TGGTGACGTT CCACCGGCTC AACGACCGGC AGACCAGGGT CCACCTGCAG 
ATGGACTACG AGCCCGAGAC CCTGACCGAG AAGGCCGGGG CCGCGCTGGG CATCGTGGAG 
CACCGGGTGA ACGGCGACCT GAAGCGGTTC AAGGAGTTCA TCGAGAACGC GGGCTCCGAG 
ACCGGTTCCT GGCGCGGTGA CGTGCCCCGC GAGCCGCAGG CGGGCGAGGG CGGGCACCGG 
ATGCCGCCCG GCGGCGCCGC CACCACCCCG AACCCCGGCG CCACGCCGGG CGTCGCGGGC 
CCCGGCGTGA CCCCCGGTCT GGCGGGTCCC GGCACGGGGG GTCCGGGCGG CGCGACGCAC 
CGCGACCCGC TGTCCTGA
 
Protein sequence
MTTIEKSVDV EVPVSTAYNQ WTQFESFPRF MEGVENITQV SDTRTHWVTS IGGVKREFDA 
EITEQHPDER VAWHTVEGPQ QAGVVTFHRL NDRQTRVHLQ MDYEPETLTE KAGAALGIVE 
HRVNGDLKRF KEFIENAGSE TGSWRGDVPR EPQAGEGGHR MPPGGAATTP NPGATPGVAG 
PGVTPGLAGP GTGGPGGATH RDPLS