| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1795 |
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| Symbol | |
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| ID | 8325980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1976134 |
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| End bp | 1977273 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644942344 |
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| Product | xylose isomerase |
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| Protein accession | YP_003099589 |
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| Protein GI | 256375929 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000406384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGACT TCAGCTTCGG CCTGTGGACG GTTGGCTGGC AGGGGCGTGA CCCGTTCGGG
GACGCCACCC GGCCCGTCCT CGACGCGCCA ACGGCGGTGC GCAAGCTCGC CGAGCTGGGC
GCCTGGGGCG TCACCTTCCA CGACGACGAC CTGATCCCCT TCGGGGCCGG CGCCGCCGAG
CGGGACCGGC GGGTCTCCGC GTTCCGCGGC GCGCTCGACG AGACCGGGCT CGTCGTGCCG
ATGGTGACCA CGAACCTGTT CACCCACCCC GTCTTCAAGG ACGGCGGCTT CACCAGCAAC
GACCGGTCGG TGCGCCGGTT CGCGCTGCGC AAGGTGCTGC GCAACCTGGA GCTCGCCGCC
GAGCTCGGCG CCAAGACGAT CGTCCTGTGG GGCGGTCGCG AGGGCTCCGA GACGGACGCG
GGCAAGGACG TGCAGGCCGC CCTGGAGCGG TACCGCGAGG CGCTGGACAC GGTCGCGCAG
CACTCCGTCG ACCAGGGCTA CGGCTTCCGG TTCGCGCTGG AGCCCAAGCC CAACGAGCCG
CGCGGCGACA TCCTGCTGCC GACCGTCGGG CACGCGCTCG CGTTCATCTC CACCCTCCAG
CACCACGAGC TGGTCGGCGT GAACCCCGAG GTCGGCCACG AGCAGATGGC CAACCTGAAC
TTCGTCCACG GCATCGCGCA GGCGCTGTGG CAGAAGAAGC TGTTCCACAT CGACCTCAAC
GGGCAGAAGG GGCCGCGCTT CGACCAGGAC CTGGTCTTCG GCCACGGCGA CCTGCTCTCG
GCGTTCTTCC TGGTCGACCT CCTGGAGAAC GGCGGCTACG ACGGCCCCCG CCACTTCGAC
TACAAGCCGC TGCGCACCGA GGACGTCGAC GGCGTGTGGG ACAGCGCCGC CGCCAACATG
CGCACCTACA CCCTCCTCAA GGAGCGCGCG CAGGCCTACC GCGCCGACCC CGAGGTGCAG
GAGGCGCTGC GGGTCAGCGG CGTCACCGAG CAGGCCGTGC CCACCCTCGG CGAGGGCGAG
TCGATCGCGG ACTTCCTCGC GGCCGACGAG TCGTTCGACC CCGACAAGGC CGCCGAGCGC
GGGTACGGGT TCGTGAAGCT GTCGCAGCTG GCCCTCGAGC ACCTCCTGGG CGCCCGCTGA
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| Protein sequence | MTDFSFGLWT VGWQGRDPFG DATRPVLDAP TAVRKLAELG AWGVTFHDDD LIPFGAGAAE
RDRRVSAFRG ALDETGLVVP MVTTNLFTHP VFKDGGFTSN DRSVRRFALR KVLRNLELAA
ELGAKTIVLW GGREGSETDA GKDVQAALER YREALDTVAQ HSVDQGYGFR FALEPKPNEP
RGDILLPTVG HALAFISTLQ HHELVGVNPE VGHEQMANLN FVHGIAQALW QKKLFHIDLN
GQKGPRFDQD LVFGHGDLLS AFFLVDLLEN GGYDGPRHFD YKPLRTEDVD GVWDSAAANM
RTYTLLKERA QAYRADPEVQ EALRVSGVTE QAVPTLGEGE SIADFLAADE SFDPDKAAER
GYGFVKLSQL ALEHLLGAR
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