Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1789 |
Symbol | |
ID | 8325974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1965745 |
End bp | 1966776 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644942338 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003099583 |
Protein GI | 256375923 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGACG CCGTTGAGCC GCCCAAGGCC CGAAGGCCCC CGACCAGGCT CGAAGAGGTC GCCAGAGCCG CCGGGGTGTC GAAGTCGACC GTGTCGAGGG TGATCAACGG CGAGCCGTAC GTCAGCACCA AGGCGCGCGA GGCCGTTCAC CAGGCGATCG TTCAGCTGGG GTACAGCCCC AACCAGGCCG CCCGCACCCT TGCGGGCAGC AGGGCGAACT GCATCGCGCT GGTGGTGTCC GAACAGGGCA GCCGGGTGCT GGCGGACCCG TTCTTCGCGG GCGTGCTGCG AGGCGTGCAC GCGGAGCTGT CGGGCAAGAG GGTCCAGCTC GTGCTCATGA TGAGCAAGGA GGGCGACGAG CAGGACCTGG TGAACTACCT GTGCGGCGGC CACGTCGACG GCGTGCTGGT GATCAGCCTG CACGGCCAGG ACCCGCTGCC CCGCGTGCTC GCCGACGCGG GCCTGCCCAC CGTCGTCGGT GGCAGGCCCC TCGGCGCGGG CGGGGTGCCG TACGTGGACT CGGACAACTT CAACGGGGCC ATGGAGGCGG CCAAGCACCT GGTCTCGCTG GGGCGCACGA GGATCGCGAC CATAGCGGGC CCGAAGGACA TGGCCGTGGG CATGGACCGG CTGAGCGGGT TCAAGCGGGC GCTGAGCCAG GCCGGGCTGC GCGACGACCT GGTGGCGTTC GGCGACTTCA CCCCGGCCAG CGGCGCCGCC GCGATGGACG AGCTGCTGAC CCGCGAGCCC GCGCTGGACG CGGTGTTCGT GGGGGCCGAC ATCATGGCGA TGGGCGCGCT GCAGGCGCTG CACGCGCAGG GCAAGCGGGT GCCGCAGGAC GTGGCCGTGG TGGGCTTCGA CGACCTGGTG CTGGCGTCGA CGGCGGTCCC GCCGCTGACG ACGGTCAGGC AGGACGTGGA GCAGCTGGGC CGCACGATGA CGTGGCGCCT GATGGCGGAG CTGACGGGCG AGGAGAACCT CCCGCCGTTC CTGCTCCTGC CGACCTCGCT GGTGCACCGG GCCAGCGCGT AG
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Protein sequence | MTDAVEPPKA RRPPTRLEEV ARAAGVSKST VSRVINGEPY VSTKAREAVH QAIVQLGYSP NQAARTLAGS RANCIALVVS EQGSRVLADP FFAGVLRGVH AELSGKRVQL VLMMSKEGDE QDLVNYLCGG HVDGVLVISL HGQDPLPRVL ADAGLPTVVG GRPLGAGGVP YVDSDNFNGA MEAAKHLVSL GRTRIATIAG PKDMAVGMDR LSGFKRALSQ AGLRDDLVAF GDFTPASGAA AMDELLTREP ALDAVFVGAD IMAMGALQAL HAQGKRVPQD VAVVGFDDLV LASTAVPPLT TVRQDVEQLG RTMTWRLMAE LTGEENLPPF LLLPTSLVHR ASA
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