Gene Amir_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1789 
Symbol 
ID8325974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1965745 
End bp1966776 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content72% 
IMG OID644942338 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003099583 
Protein GI256375923 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACG CCGTTGAGCC GCCCAAGGCC CGAAGGCCCC CGACCAGGCT CGAAGAGGTC 
GCCAGAGCCG CCGGGGTGTC GAAGTCGACC GTGTCGAGGG TGATCAACGG CGAGCCGTAC
GTCAGCACCA AGGCGCGCGA GGCCGTTCAC CAGGCGATCG TTCAGCTGGG GTACAGCCCC
AACCAGGCCG CCCGCACCCT TGCGGGCAGC AGGGCGAACT GCATCGCGCT GGTGGTGTCC
GAACAGGGCA GCCGGGTGCT GGCGGACCCG TTCTTCGCGG GCGTGCTGCG AGGCGTGCAC
GCGGAGCTGT CGGGCAAGAG GGTCCAGCTC GTGCTCATGA TGAGCAAGGA GGGCGACGAG
CAGGACCTGG TGAACTACCT GTGCGGCGGC CACGTCGACG GCGTGCTGGT GATCAGCCTG
CACGGCCAGG ACCCGCTGCC CCGCGTGCTC GCCGACGCGG GCCTGCCCAC CGTCGTCGGT
GGCAGGCCCC TCGGCGCGGG CGGGGTGCCG TACGTGGACT CGGACAACTT CAACGGGGCC
ATGGAGGCGG CCAAGCACCT GGTCTCGCTG GGGCGCACGA GGATCGCGAC CATAGCGGGC
CCGAAGGACA TGGCCGTGGG CATGGACCGG CTGAGCGGGT TCAAGCGGGC GCTGAGCCAG
GCCGGGCTGC GCGACGACCT GGTGGCGTTC GGCGACTTCA CCCCGGCCAG CGGCGCCGCC
GCGATGGACG AGCTGCTGAC CCGCGAGCCC GCGCTGGACG CGGTGTTCGT GGGGGCCGAC
ATCATGGCGA TGGGCGCGCT GCAGGCGCTG CACGCGCAGG GCAAGCGGGT GCCGCAGGAC
GTGGCCGTGG TGGGCTTCGA CGACCTGGTG CTGGCGTCGA CGGCGGTCCC GCCGCTGACG
ACGGTCAGGC AGGACGTGGA GCAGCTGGGC CGCACGATGA CGTGGCGCCT GATGGCGGAG
CTGACGGGCG AGGAGAACCT CCCGCCGTTC CTGCTCCTGC CGACCTCGCT GGTGCACCGG
GCCAGCGCGT AG
 
Protein sequence
MTDAVEPPKA RRPPTRLEEV ARAAGVSKST VSRVINGEPY VSTKAREAVH QAIVQLGYSP 
NQAARTLAGS RANCIALVVS EQGSRVLADP FFAGVLRGVH AELSGKRVQL VLMMSKEGDE
QDLVNYLCGG HVDGVLVISL HGQDPLPRVL ADAGLPTVVG GRPLGAGGVP YVDSDNFNGA
MEAAKHLVSL GRTRIATIAG PKDMAVGMDR LSGFKRALSQ AGLRDDLVAF GDFTPASGAA
AMDELLTREP ALDAVFVGAD IMAMGALQAL HAQGKRVPQD VAVVGFDDLV LASTAVPPLT
TVRQDVEQLG RTMTWRLMAE LTGEENLPPF LLLPTSLVHR ASA