Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1785 |
Symbol | |
ID | 8325970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1961227 |
End bp | 1962501 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644942334 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003099579 |
Protein GI | 256375919 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.155279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCAACC GTCGAGCAGG CCTGGGTAGC CTCCTGGCCT GCACCGCAGT GCTCGCAGCG GTCACCACCG CCTGCGGTTC GGACAGTGGG ACCAGTGCCG ATGGCAAGAT CGAACTCACC ATCGCCACGT TCAACCAGTT CGGGTACGAG GAGCTCCTCA AGGAGTACGA GGCGGCTCAC CCCAACATCA AGGTGAGCGA GCGCAAGACC GGTCAGGCCG CTGACCACCA CAAGAACCTC TTCACCAAGA TGGCGGCGGG CTCCGGCCTC TCCGACGTCG AGGGCGTCGA GGAGGGCTAC CTCAGCCAGG TCATGACCCG CGCGGGCCAG TTCAACAACC TCAAGGAGAT CGGCCCGAAC GTCGACGGCC GCTGGCTGGA CTGGAAGACC AAGTCGGTCA CGGCCAAGGG CGGCGAGCTG ATCGGCTACG GCACCGACAT CGGCCCGCTG GCCATGTGCT ACCGCAAGGA CCTCCTGGAG GCCGGTGGCA TCCCCACCGA CGAGGCAGGC ATCGCCGCCA CGTTCGCCAC CTGGGACTCG TACTTCGCCG CGGGCAAGCA GTACGCGGAG AAGACCGGCA AGGCCTGGTT CGACTCGGCC GCGCAGATCT TCAACCCGAT GCACAACCAG GCCGAGCTCG GCTACTTCGA CAAGGACGAC AAGCTCGTCA TCGACTCCAA CGGCGACAAG GCCATCTGGG GCAAGGTGAC CGCCGCCGTC GCGCAGGGCC AGTCCGCGAA GCTCAAGGCG TGGACCCCCG AGTGGGAGAC CGGCTTCCGC GAGTCGGCCT TCGCCACCAA GACCTGCCCG GCGTGGCTGC TCGGCAACAT CGAGAAGAAC TCCGGCCCCG AGCACAAGGG CAAGTGGGTC GTCACCGGCT CCTTCCCCGA CGGCGGCGGC AACTGGGGCG GCTCGTTCCT GACCGTGCCC AAGCAGAGCA AGCACCCGAA GGAAGCCGCT GAGCTGGCTG CCTGGCTGAC CGCGCCCGAG CAGCAGATCA AGGCGTTCAA GGCCAAGAAC ACCTTCCCGA GCCAGCTCGA GGCGCTCGAC AACCCCGAGC TGACCGAGAG CACCAACGAG TACTTCGGCC AGCAGGTCGG CAAGCTCTAC GCGGAGCAGG CCAAGAAGGT CGACGTGGCC CAGTACAAGG GCCCGAAGGA CGGCCAGATC CAGGACGACA TCGTCGGCCC GGCGCTGCTG TCGGTCGAGC AGGGCACCAA CGCGGACGAG GCGTGGAAGA AGGTCGTCGA GGACGCCCAG AAGGCGACCA AGTGA
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Protein sequence | MRNRRAGLGS LLACTAVLAA VTTACGSDSG TSADGKIELT IATFNQFGYE ELLKEYEAAH PNIKVSERKT GQAADHHKNL FTKMAAGSGL SDVEGVEEGY LSQVMTRAGQ FNNLKEIGPN VDGRWLDWKT KSVTAKGGEL IGYGTDIGPL AMCYRKDLLE AGGIPTDEAG IAATFATWDS YFAAGKQYAE KTGKAWFDSA AQIFNPMHNQ AELGYFDKDD KLVIDSNGDK AIWGKVTAAV AQGQSAKLKA WTPEWETGFR ESAFATKTCP AWLLGNIEKN SGPEHKGKWV VTGSFPDGGG NWGGSFLTVP KQSKHPKEAA ELAAWLTAPE QQIKAFKAKN TFPSQLEALD NPELTESTNE YFGQQVGKLY AEQAKKVDVA QYKGPKDGQI QDDIVGPALL SVEQGTNADE AWKKVVEDAQ KATK
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