| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1773 |
|---|
| Symbol | |
|---|
| ID | 8325958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1946919 |
|---|
| End bp | 1947677 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644942322 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003099567 |
|---|
| Protein GI | 256375907 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGG TCAGGGCCGT CGGAGTGCGG AAGTCCTACG GGCACGACGA GGTGCTCAGC
GGCGTCGACC TGGAGGTCGC GGCCGGGCAG GTGTGGTGCC TGCTGGGGCC GTCCGGCGCG
GGCAAGAGCA CGTTCCTGCG CTGCGTGAAC CACCTGGAGA CCATCGACTC CGGCCGGATC
TGGGTCGACG GCGAGCCGGT CGGGTTCGCC GCCAGGGGCG GGAAGCTGCA CGAGCTGCGC
GAGCGCGAGG TCGCGAAGCA GCGGCGCGGC ACCGGCATGG TGTTCCAGCG CTTCAACCTG
TTCCCGCACC GCACCGCGCT GGAGAACATC ACCGAGGGGC CGGTGCAGGT GCTCCGCGAG
TCCAAGTCGG ACGCCGTCGC CCACGCCCGC GAGCTGCTGG AGAAGGTCGG GCTGGCCGAC
AGGGCGAACG CCTACCCGAA CCAGCTCTCC GGCGGGCAGC AGCAGCGGGT CGCGATCGCC
CGCGCGCTGG CCATGCGGCC CAAGGTGATG CTGTTCGACG AGCCGACCTC CGCGCTGGAC
CCGGAGCTGG TGGGCGACGT GCTGGACGTC ATGGCGGGGC TCGCGGCGGA CGGCATGACG
ATGCTGGTGG TCACGCACGA GATCGGGTTC GCCAGGCAGG TGGCCGACGA GGTCGCGTTC
CTGGACGGCG GGGTCGTGGT CGAGTCCGGG CCGCCCGACC AGGTGCTGGA GAATCCGCGT
GAACCCAGGA CCCGGCAGTT CCTCTCGAAG GTGCTCTAG
|
|---|
| Protein sequence | MSLVRAVGVR KSYGHDEVLS GVDLEVAAGQ VWCLLGPSGA GKSTFLRCVN HLETIDSGRI
WVDGEPVGFA ARGGKLHELR EREVAKQRRG TGMVFQRFNL FPHRTALENI TEGPVQVLRE
SKSDAVAHAR ELLEKVGLAD RANAYPNQLS GGQQQRVAIA RALAMRPKVM LFDEPTSALD
PELVGDVLDV MAGLAADGMT MLVVTHEIGF ARQVADEVAF LDGGVVVESG PPDQVLENPR
EPRTRQFLSK VL
|
|---|
| |