| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1750 |
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| Symbol | |
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| ID | 8325935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1919236 |
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| End bp | 1920591 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644942299 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_003099544 |
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| Protein GI | 256375884 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000566962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGAAGC AGTTCCACAA GGCGACCGCG GTGTGCGGCG CAGCTGCCGT GGGAGCGACC
CTCCTGCTGG CCCCCGGCGC AGCGCTCGCA GCGCCCGCCC AGTCCCAGAA GGCCGCCGCG
CCCGCATCGC GCGTGCTCGG CTACGTCGCC AACAACGGCG GCGGCGTGTC CGTCCTCGAC
ACCGCCACGG ACCAGGTGAC CAGCACCGTC AACGGCGGCG ACGGCGCGAA CTCGCCGTAC
GGCGTCGAGG TCGCCTTCGA CGGCGCGCGC GGCTACGTCA CCAACGTCCG CGACAACACC
CTGACCGTCT TCAACACCGT CACGAACGCC GTCGAGGCGA ACGTCCCGGT GGGCGACGGC
CCGGCGGGCG TCGTGGTCTC CCCGACCGGC GCCCAGGTGT ACGTGAGCAA CTACCGCTCC
GGCACCGTCT CGGTCGTCGA CACCGCCACC CTGGCCACCA CGGACACCAT CACCGTCGGC
CCGAACGCGG ACGGCGTCAC CCTCAGCCCG GACGGCTCGC GCCTGTTCGT CGCCCACGAC
GTCCCCGGCC AGGGCACCGT CTCGGTCGTC GACACCACCA CGAACCTCCA GCTGCTGGAC
ATCCCGACGG GCGCGACCCC GACCGATGTC GCGGTCACCC CGGACGGCGC CAAGCTGCTC
GTGGTCAACA AGATGTCGAC CAACGTCGTC GTCATCAACC TGACCGGCCT GCTCACCAAC
AGCAAGATCG TGGCCACCAT CCCGGTCGGC TGGGTGCCCC ACGGCATCGC CGTGACCGCG
GACGGCAAGC GCGCCTTCGT CACCAACAGC GAGTCCGACT CGGTCAGCGT CCTCGACCTG
GACAAGCTGG CCCCGGTCAC CGACATCCCG GTGGGCGACC GCCCGATCGG CGTCGCCCTC
ACCCCGGACG GCCGCAAGGC GTACGTCACG AACTTCAACA GCAACACCGT CTCGGTCCTG
GACACCAAGA CCCTGGCCGT CACCGGCACG GTCCCCGTCG GCACCAACCC GGTGGGCGTG
GCCGTCCACA CCATCGCCGA CGCCGCGACC ACCCTGACCG CGGGCAAGGC GACCGTGAAG
TTCCGCCTGT TCGGCACCAC CATCAACAAC CTGACCGCGA CCCTCACCGA GTCCGCGTCG
GGCAAGCCGG TGGCGAACAA GGAGATCACC TTCACCACCC TGAAGGGCAC CAAGCTCTGC
ACCGCGAAGA CGAACGCGGC AGGCGTGGCG AAGTGCGACG CGAAGGTCCT CATCATCGTG
GGCCTGTCCG CAATCCTGGG CGGCTACACC GCGTCCTACG CGGGCGACAC CGCCCACGGC
AAGTCCGTGG CCCGAGGCTG GAACTTCCTC GGCTAA
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| Protein sequence | MLKQFHKATA VCGAAAVGAT LLLAPGAALA APAQSQKAAA PASRVLGYVA NNGGGVSVLD
TATDQVTSTV NGGDGANSPY GVEVAFDGAR GYVTNVRDNT LTVFNTVTNA VEANVPVGDG
PAGVVVSPTG AQVYVSNYRS GTVSVVDTAT LATTDTITVG PNADGVTLSP DGSRLFVAHD
VPGQGTVSVV DTTTNLQLLD IPTGATPTDV AVTPDGAKLL VVNKMSTNVV VINLTGLLTN
SKIVATIPVG WVPHGIAVTA DGKRAFVTNS ESDSVSVLDL DKLAPVTDIP VGDRPIGVAL
TPDGRKAYVT NFNSNTVSVL DTKTLAVTGT VPVGTNPVGV AVHTIADAAT TLTAGKATVK
FRLFGTTINN LTATLTESAS GKPVANKEIT FTTLKGTKLC TAKTNAAGVA KCDAKVLIIV
GLSAILGGYT ASYAGDTAHG KSVARGWNFL G
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