| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1745 |
|---|
| Symbol | |
|---|
| ID | 8325930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1912915 |
|---|
| End bp | 1914135 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644942294 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003099539 |
|---|
| Protein GI | 256375879 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGA GGCGGCGGGT GCACCAGGTC GCGAACATCG TTCGGGACGG CGGGCTGCGG
GGGTTGGGCG CGCGGGCGCT GGGGAGGGTC GCGGCCCGGC TGGGCGGGGA CGGGGAGGTG
TTCCCGGTCC GGCTGGAGGA CGTGCGGGCC GCCGACGTGA CCCGGCGACC GCCGGTGGTC
GTGCCGCCGA TGCCGCCGGA CGGGCGGCTG ACCGTGAACT GGGTCTGCAC ACCCCCCTCC
CCCGGTTCCG GCGGCCACAC CACGATGTTC CGCCTGGTGG AGCACCTGGA GGCCGCAGGC
CACACCTGCC GCCTCTACCT GTACGACGTC TACGGCAGCC GCGCGGCGGA CCACGAACCG
GGCATCCGAG CCGCCTACCC CGGCTTCCGG GGCGAGATCC ACGACGTGAC CGGGGGCATG
GCCGACGCGC ACGCCGTCTT CGCCACCGCC TGGATGACCG CCTACCCCGT GTTCAACGAC
CCGTGCGCGG GCAAGCGCTT CTACCTCGTG CAGGACTACG AGCCTTGGTT CTTCCCCCGC
GGCGGCCTCT CGGCACTGGC CGAGAACACC TACCGGATGG GCTTCCACGG CTTCACCGCG
GGCCGCTTCC TGGCCGGAAA GCTCCACGAC GACGCCGGAA TGGCCGCGGA CTCGTTCGAC
TTCGGCTGCG ACACAACCCG CTACCGCCTC CTGGACGGCG CGCGCCGAGA CGGCGTGGTC
TTCTACGCGA GACGCCTGGC CCCACGCCGG GCGATCGAGG TGGGCCTGCT GGCCCTGGAG
GTCTTCACCC GCGAACACCC GGAAGTCGTA GTGCACACCT ACGGCGAGAA GATCGGCTCG
CTGGGCAACG GCCACATCGA CCACGGCCTG GTGACCCCGG ACGAGCTGAA CCGGATCTAC
AACCGCTGCT ACGCCGGTTT GTCACTGTCC ATGACGAACG TGTCCCTGGT CCCGCACGAA
ATGCTGGCGG CGGGATGCAT ACCCGTGGTG AACGAGGCAG AGCACAACAA AATCGTCCTG
GACAACGAGT TCGTCCGCTA CGCCCCCGCA ACCCCCCACG AACTGGCAAG GGCAATGGCC
AACGTGGTGA CCATGAAGCC ACAAGACTTC GACGCCCTGG CCACCAAGGC CGCCGGAAGC
GTAACCGGCC GCTCCTGGGA CGACGCAGGC AGAGAGCTGG ACCGGTTGCT GCGACGCGAA
CTGGGAACGC CCGAAGCCTA A
|
|---|
| Protein sequence | MSVRRRVHQV ANIVRDGGLR GLGARALGRV AARLGGDGEV FPVRLEDVRA ADVTRRPPVV
VPPMPPDGRL TVNWVCTPPS PGSGGHTTMF RLVEHLEAAG HTCRLYLYDV YGSRAADHEP
GIRAAYPGFR GEIHDVTGGM ADAHAVFATA WMTAYPVFND PCAGKRFYLV QDYEPWFFPR
GGLSALAENT YRMGFHGFTA GRFLAGKLHD DAGMAADSFD FGCDTTRYRL LDGARRDGVV
FYARRLAPRR AIEVGLLALE VFTREHPEVV VHTYGEKIGS LGNGHIDHGL VTPDELNRIY
NRCYAGLSLS MTNVSLVPHE MLAAGCIPVV NEAEHNKIVL DNEFVRYAPA TPHELARAMA
NVVTMKPQDF DALATKAAGS VTGRSWDDAG RELDRLLRRE LGTPEA
|
|---|
| |