| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1739 |
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| Symbol | |
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| ID | 8325924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1906676 |
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| End bp | 1908073 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644942288 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_003099533 |
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| Protein GI | 256375873 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCGGA TCAGGCAGCG GGCCGACGGG GCGACCCTCG TCTGCCTGTA CCTGCTCGCG
CTGCTGGCCA TCCCGGCGCG CCTGGTGCTG TCGTTCGTGC CGATGACGCT GCCGCCCGCG
CTGGTCGTGG CTCTGGTGCT GGGCGTGCTG TGGCTGTCCG CGCAGATGGT CGACACGCTG
AACATGGGCA AGGGCCGCAA CGCCCTGCGC ACCGCCGTGG CGATCTACCT GACGCTGCAC
CTGTGCACGT ACGCCGTGGC GACGCGCCGC TTCCTGCCGA TCGACGAGCT GACCGTGGCG
GACAGCGGCA TGGTCCGGAT CGTGGCCACG GCCAGCGTCG CGATCTTCGC CTGCGACGCC
GTCCGCACGC GGGAGCGGCT CGACCGGGTG ATGAAGCTGA TCCTGGTGTG CACGGCCGGG
ATCGCGTTCG TGGGCCTGGT GCAGTTCGGG CTGGGGATCG ACCTGGCCGG GTACGTCTCC
ATCCCCGGTC TGCGGGCGCA GGAGAACGTG TACGCCGCCA TGGAGACCCG GTCGATCTTC
CGGCGGCCCA CCGGGACCAC GAACCACCCC ATCGAGTACG GGCTGGTGTG CGCCATGTCC
GTGGGGATCG GGGCGCACTA CGTGTTCCAG TCCCGCGACG AGGGCAAGCC GTACGTGCGC
TGGCTGGTGT GCCTGGCCCT GGTCGGCCTC GGGGCGATGA CCGCGCTGTC GCGGACCGCG
ATCCTGGGCA TGACCGTCGC CGGGGTGGTC ATGGTGGCGA CCATGCCCAA GCGGCGGAAG
CTGACCGTGG TGCTGGTCGG CGGCGGGTTC TTCCTCGGGG CGAGCCTGGT GGTGCCGGGC
CTGTTCGGCA CGTTGCGCGG CATGTTCTCG AACATCAGCG ACGACCCGAG CGTGAAGGCC
AGGACCTCGG ACTACGAGGC GGCGAACGAG CAGATCGCGC TGCACCCGCT GCTGGGCCGG
GGGTTCGGGA CGTTCCTGCC GACCAAGAAC CCGATCCTGG ACAACCAGTT CCTGCTGACG
ATGATCGAGA ACGGCTACCT GGGGCTGTTC GCGCTGGTCG GAATGTTCCT GGCGGCGTGC
TACGCGGTGC TGCGGACGCG GCTGCTGAGC TCGGACGAGA ACGTGCGGGG CATGGCCGCC
TGCCTGCTGT CGGCGGTGCT GGTCGGCGGG ATCGCGTCGG TGACGTTCGA CCTGCTGGCG
TTCAGCATCG CCACCGGGAT GGTGTTCGTG ATGCTGGGGC TGAGCGGCGC GGCGCTGCGG
ATCGCCCAGG CCGAGGCCGC CGAGCGCGGC TGGGCGCCCG CGCCGGGACG CGGGCGGCTG
GGGGGCAAGC TGAAGACCGC GCCCCGTCTG CGGGGCAGGT CCACCAAGCC AGAGGAAGCG
GACGCCGCCG ACGGATGA
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| Protein sequence | MERIRQRADG ATLVCLYLLA LLAIPARLVL SFVPMTLPPA LVVALVLGVL WLSAQMVDTL
NMGKGRNALR TAVAIYLTLH LCTYAVATRR FLPIDELTVA DSGMVRIVAT ASVAIFACDA
VRTRERLDRV MKLILVCTAG IAFVGLVQFG LGIDLAGYVS IPGLRAQENV YAAMETRSIF
RRPTGTTNHP IEYGLVCAMS VGIGAHYVFQ SRDEGKPYVR WLVCLALVGL GAMTALSRTA
ILGMTVAGVV MVATMPKRRK LTVVLVGGGF FLGASLVVPG LFGTLRGMFS NISDDPSVKA
RTSDYEAANE QIALHPLLGR GFGTFLPTKN PILDNQFLLT MIENGYLGLF ALVGMFLAAC
YAVLRTRLLS SDENVRGMAA CLLSAVLVGG IASVTFDLLA FSIATGMVFV MLGLSGAALR
IAQAEAAERG WAPAPGRGRL GGKLKTAPRL RGRSTKPEEA DAADG
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