Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1730 |
Symbol | |
ID | 8325915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1893873 |
End bp | 1895276 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942279 |
Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
Protein accession | YP_003099524 |
Protein GI | 256375864 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.659205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCGCT GGGAACCGGC GTACCGGCGC AGCGTCATCG CCGCCGACCT GCTCTGCACC CTCCTGGTGG TCCTGCTGGC CGGCTACCTC ATGTCGGTCA ACCACGTCAC GTTCGGCCCG CTGCACCTCG TCGCCCTCGA AGCGGTCACC GTCGTGGTGG TCGTGGGCTC GCTGTGCGTG AACCGGGTCT GGAGCGCGTC CGTCCTGGGG CAGGGCGCCG AGGAGTTCCG AAGACTGGGC CGCGCGATCG GCTCCGCCGT CGTGGTCATG GGCCTGGGCG CGCTGGCGGT GGGCCTGCCC GGCGGGCGGA GCTGGGTGTT CCTGGTCGGA CCGGCGGTCG CGCTGGTCGC CTTCCCGGTC CGCTACGCGC TGCGCCGCCC GCTGCACCGC GCCCGCGGTG AGGGCCGCTG CCTGCTGCCG GTGCTGGCCG CGGGCAACGT CGACACCGTC AAGGACCTGA TCGGCCGCAC CCGCCGCGCC CCGCACCTGG GCTGGCGCGT CGACGCGATC TGCACCGTCG ACGGCCGCGC CGAGATGGGC GTCGAGGTGG ACGGCATCCC CGTGGTCGGC CGCTTCGGCG AGCTGGCCGA GCAGGTGCGC CGGGGCGGCT ACCGCATCGT CGCGGTCACC CCCGACGCCT ACTGGACGCC CAAGCGCCTC CAGCAGCTCG CCTGGGACCT GGAGGGCTCC GGCACCGAGA TGGTCGTCGC GCCCGCCCTG ATGGACTTCG CCGGACCGCG CCTGCACGTC ACCGGCGTGC TCGGGATGCC GCTGCTGCGG GTGTCCGAGC CGGTCTTCAC CGGTTTCCGC CGCGTGGTCA AGGCCACCTT CGACCGCCTC GGCTCGGCGG TCCTGCTCAC CCTCCTCGCC CCGGTCCTGC TGACCGTGGC CGTCGCGATC ATGATCGACA GCCGGGGTCC GGTGCTCTAC AGGCAGAGCC GCGTGGGCAA GGACGGCGTT CCCTTCACGA TCCTGAAGTT CCGGACGATG GTGACCAATG CCGACGCGCT GCGCTCGCAG CTCCAGTCGG TCAACGAGGG CTCCGGCGTG CTGTTCAAGA TGCGCCGCGA CCCGAGGGTG ACCGGCGTCG GCCGCGTCCT GCGCCGCTAC TCGCTGGACG AGCTGCCCCA GCTGCTCAAC GTGCTCGGAG GGACCATGTC GCTGGTGGGT CCCCGGCCGC CGCTGCCCGA GGAGAGCGCC AAGTACGGCC CCGACGTGCG GCGCCGACTG CTGGTCAAGC CCGGTCTGAC CGGCCTGTGG CAGGTCTCCG GGCGCAGCGA CCTGTCGTGG GAGGAGTCCG TGCGGCTCGA CCTGCGGTAC GTGGAGGACT GGTCGCTCGC GCTGGACGCG CTGATCCTGT GGAAGACCTT CCGCGCCGTC TTCGGCGGTC AGGGGGCCTA CTGA
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Protein sequence | MNRWEPAYRR SVIAADLLCT LLVVLLAGYL MSVNHVTFGP LHLVALEAVT VVVVVGSLCV NRVWSASVLG QGAEEFRRLG RAIGSAVVVM GLGALAVGLP GGRSWVFLVG PAVALVAFPV RYALRRPLHR ARGEGRCLLP VLAAGNVDTV KDLIGRTRRA PHLGWRVDAI CTVDGRAEMG VEVDGIPVVG RFGELAEQVR RGGYRIVAVT PDAYWTPKRL QQLAWDLEGS GTEMVVAPAL MDFAGPRLHV TGVLGMPLLR VSEPVFTGFR RVVKATFDRL GSAVLLTLLA PVLLTVAVAI MIDSRGPVLY RQSRVGKDGV PFTILKFRTM VTNADALRSQ LQSVNEGSGV LFKMRRDPRV TGVGRVLRRY SLDELPQLLN VLGGTMSLVG PRPPLPEESA KYGPDVRRRL LVKPGLTGLW QVSGRSDLSW EESVRLDLRY VEDWSLALDA LILWKTFRAV FGGQGAY
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