| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1717 |
|---|
| Symbol | |
|---|
| ID | 8325902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1876598 |
|---|
| End bp | 1877743 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644942266 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_003099511 |
|---|
| Protein GI | 256375851 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCA ACCACGTCCC CCTGCTCACC GCCGCGCTAG CGGTCGTCGC GCTCGCCACG
CCCGCGTCGG CCGAGGAGGG CCGGGTGCTG TCCGCCGCGT CCCCCGACGC GATCCCCGGC
AGCTTCCTGG TCCAGCTCAA GCCCACCGCC TCCGCCGCCG ACTTCGACGG CTCCGGCGTC
CGCGCCCCCG GCGTGCGGGC CGAGCGCGTC CTCGAAGGCG CGTTCCACGG CTTCACCGCC
CGCCTCACCG ACCGGCAGGC CAGACGCCTG GCCGCGCACC CCGACGTCGA GCTCGTCGAG
CAGGACCAGG TCGTCCGGCC GTACGCGGTC CAGACCAACC CGCCGTGGCA CCTTGACCGG
CTCGACCAGG TCGCCCTGCC GCTGAACGCC CAGTACGGCT ACACCACCAC CGGCCAGGGC
ACCCGCGCCT ACGTCGTGGA CACCGGCGTG CGGATCACCC ACCAGCAGTT CGGCGGCCGG
ATCTGCGCGG GCTGGGACGT GGTCGAGAAC GACGAGATCG GCCAGGACCT CAACGGCCAC
GGCACGCACG TCGCCGGGCT CATCGCGGGC AGCACCCACG GCGTCGCCAA GAGCGCCAGC
ATCTGCCCGG TGCGGGTGTT CGACGCCAAC GGCTCCGGCA CCACCGCCGG GGTCGTGCAG
GCGGTCAACT GGATCCGGCT CAACGCGGTC AAGCCCGCCA CCGCCAACTT CAGCCTCGGC
GGGGCCGCCT CCACCGCGCT CGACACCGCC GTCCAGGCCC TGATCACCTC GGGCGTCACC
GCCTCGGTCA CCGCCGGTGG CAGCAACGGC GACGCCGCGA ACCACTCGCC CGCCCGCGTG
GCCGCCGCCA TCACCTCCGG CGCGACCACG AACACCGACG CCCGCGCCCC GTACTCCAAC
TACGGCTCGA TCGTGGACGT CTACGCGCCC GGCCAGTCGA TCACCTCGGC CTGGCACACC
AGCGACACCG CGACCAACAC CCTCAGCGGC ACGTCCATGT CCACCGCCCA GGTGACCGGC
GTGGCCAACC GCTACCTGCA CGCCAACCCG ACCGCCACGC CCGCCCAGGT GCACGGGGCG
ATCGTCTCCT GGGCGACGCC CCAGCCGTGG GGCGGAAAGC TGCTCCACTG GCCGCCGCAA
CTCTGA
|
|---|
| Protein sequence | MSRNHVPLLT AALAVVALAT PASAEEGRVL SAASPDAIPG SFLVQLKPTA SAADFDGSGV
RAPGVRAERV LEGAFHGFTA RLTDRQARRL AAHPDVELVE QDQVVRPYAV QTNPPWHLDR
LDQVALPLNA QYGYTTTGQG TRAYVVDTGV RITHQQFGGR ICAGWDVVEN DEIGQDLNGH
GTHVAGLIAG STHGVAKSAS ICPVRVFDAN GSGTTAGVVQ AVNWIRLNAV KPATANFSLG
GAASTALDTA VQALITSGVT ASVTAGGSNG DAANHSPARV AAAITSGATT NTDARAPYSN
YGSIVDVYAP GQSITSAWHT SDTATNTLSG TSMSTAQVTG VANRYLHANP TATPAQVHGA
IVSWATPQPW GGKLLHWPPQ L
|
|---|
| |