Gene Amir_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1677 
Symbol 
ID8325862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1832382 
End bp1833689 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content77% 
IMG OID644942227 
ProductROK family protein 
Protein accessionYP_003099472 
Protein GI256375812 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGAAG TGGGCGGCAT CCTGCCGACC ATGCCTGCCA AGCGCGCCAC CGTGCGCGAC 
CTGCGACGTC ACAACCGATC GGCGCTGCTG TCGACCCTGT ACTTCGAAGG CCCGCTGAGC
AGGCAGGAGC TGGTCGCCAG GACCGGTCTG AGCGCCGCCA CGGTGTCCAC CGCGACCGCC
GGGCTGGTCG ACGAGCGGCT CGTCGTCGGT GCGGGAACGG TCGAGTCGGA CGGCGGGAGG
CCGCGCTCGC TGCTGCGCGT CAACCCCGGC TACGGGCACG TGGTCGGCGT CGACGTCGGC
GAGACCGGGG TGGCCGTCGA GCTGTTCGAC CTGGCGCTGC GCCGGATCGC CGCGCTCGAC
CACGACCTCC CGCCCACCGA CCCGCTCGCG GTGGGCGCGC TGATCGCCGC GGCCGTGCCG
GAGGTGATCG CGCTGGCCGG GGCGGACCAG GGCTCGGTGC TGGGCGTGGG CATCGGCGTG
CCGGGCGAGG TGGAGCGGCG CGGCGGGGCG TGGGGCGCGG CGACGCTCGT GCACGCGCAG
ACCCTCGGCT GGTCGGGCGT GCCGCTCGCC GAGCTGGTCA GGGCGGGCGG CACGACGCTG
CCGCTGTTCG TGGAGAACGG CGCGAAGACC CAGGGCCAGG CCGAGATGTG GTTCGGCGCC
GGACGCGGGT CGCGGCACGT CGTGGTGGCG CTGCTGGCCT CGGGCGTGGG CGCGGCGGTG
GTGGCGGACG GCGCGGTGCA GCGCGGGTCG ACCAGCAGCG CGGGCGAGTG GGGGCACACG
ACGGTCGTCC ACGGCGGACG ACGCTGCCGG TGCGGGGCGC ACGGGTGCTT GGAGGCGTAC
GTCGGGGCGG GGGCGGTGCT GGAGCGGTAC CGGGGGCTGG GCGGGGAGCT GGGCGAGGGG
GACGAGCGGG CGGCGTTCGC GGAACTGGTG GCGCTGGCGG GTGGGGGGAC GTTGGGGGGC
GGGTCGCCGC CGGCGGGTGG GGCGCAGCTG GCGACGCGGG TGCTGGAGGA GGCGGTGGGG
TACCTGGGCG CGGGGATCGC GACCCTGGTG AACCTGTTCA ACCCCGAGCT GATCGTGCTC
GGGGGCTGGG CCGGGGCGGC CCTGGGCGAG GGCTGGTTGC CGTCGATCGT GGCGGCGACG
CGGGAGCACG CGTTGCGGCA CCCGTTCGCC CGAGTGCGCC TGGAAGCCGG GCGTCTGGGG
CCCGACGCGG TGGCCGTCGG GGCGGCGACG TTGCCGGTCG CGGCGCTGCT GGAGCGGGCC
GCCGACCCGC GTGCGCCGGT GCGCGGGCGG GCGGCGCACT TGGCCTAA
 
Protein sequence
MKEVGGILPT MPAKRATVRD LRRHNRSALL STLYFEGPLS RQELVARTGL SAATVSTATA 
GLVDERLVVG AGTVESDGGR PRSLLRVNPG YGHVVGVDVG ETGVAVELFD LALRRIAALD
HDLPPTDPLA VGALIAAAVP EVIALAGADQ GSVLGVGIGV PGEVERRGGA WGAATLVHAQ
TLGWSGVPLA ELVRAGGTTL PLFVENGAKT QGQAEMWFGA GRGSRHVVVA LLASGVGAAV
VADGAVQRGS TSSAGEWGHT TVVHGGRRCR CGAHGCLEAY VGAGAVLERY RGLGGELGEG
DERAAFAELV ALAGGGTLGG GSPPAGGAQL ATRVLEEAVG YLGAGIATLV NLFNPELIVL
GGWAGAALGE GWLPSIVAAT REHALRHPFA RVRLEAGRLG PDAVAVGAAT LPVAALLERA
ADPRAPVRGR AAHLA