Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1677 |
Symbol | |
ID | 8325862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1832382 |
End bp | 1833689 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644942227 |
Product | ROK family protein |
Protein accession | YP_003099472 |
Protein GI | 256375812 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGAAG TGGGCGGCAT CCTGCCGACC ATGCCTGCCA AGCGCGCCAC CGTGCGCGAC CTGCGACGTC ACAACCGATC GGCGCTGCTG TCGACCCTGT ACTTCGAAGG CCCGCTGAGC AGGCAGGAGC TGGTCGCCAG GACCGGTCTG AGCGCCGCCA CGGTGTCCAC CGCGACCGCC GGGCTGGTCG ACGAGCGGCT CGTCGTCGGT GCGGGAACGG TCGAGTCGGA CGGCGGGAGG CCGCGCTCGC TGCTGCGCGT CAACCCCGGC TACGGGCACG TGGTCGGCGT CGACGTCGGC GAGACCGGGG TGGCCGTCGA GCTGTTCGAC CTGGCGCTGC GCCGGATCGC CGCGCTCGAC CACGACCTCC CGCCCACCGA CCCGCTCGCG GTGGGCGCGC TGATCGCCGC GGCCGTGCCG GAGGTGATCG CGCTGGCCGG GGCGGACCAG GGCTCGGTGC TGGGCGTGGG CATCGGCGTG CCGGGCGAGG TGGAGCGGCG CGGCGGGGCG TGGGGCGCGG CGACGCTCGT GCACGCGCAG ACCCTCGGCT GGTCGGGCGT GCCGCTCGCC GAGCTGGTCA GGGCGGGCGG CACGACGCTG CCGCTGTTCG TGGAGAACGG CGCGAAGACC CAGGGCCAGG CCGAGATGTG GTTCGGCGCC GGACGCGGGT CGCGGCACGT CGTGGTGGCG CTGCTGGCCT CGGGCGTGGG CGCGGCGGTG GTGGCGGACG GCGCGGTGCA GCGCGGGTCG ACCAGCAGCG CGGGCGAGTG GGGGCACACG ACGGTCGTCC ACGGCGGACG ACGCTGCCGG TGCGGGGCGC ACGGGTGCTT GGAGGCGTAC GTCGGGGCGG GGGCGGTGCT GGAGCGGTAC CGGGGGCTGG GCGGGGAGCT GGGCGAGGGG GACGAGCGGG CGGCGTTCGC GGAACTGGTG GCGCTGGCGG GTGGGGGGAC GTTGGGGGGC GGGTCGCCGC CGGCGGGTGG GGCGCAGCTG GCGACGCGGG TGCTGGAGGA GGCGGTGGGG TACCTGGGCG CGGGGATCGC GACCCTGGTG AACCTGTTCA ACCCCGAGCT GATCGTGCTC GGGGGCTGGG CCGGGGCGGC CCTGGGCGAG GGCTGGTTGC CGTCGATCGT GGCGGCGACG CGGGAGCACG CGTTGCGGCA CCCGTTCGCC CGAGTGCGCC TGGAAGCCGG GCGTCTGGGG CCCGACGCGG TGGCCGTCGG GGCGGCGACG TTGCCGGTCG CGGCGCTGCT GGAGCGGGCC GCCGACCCGC GTGCGCCGGT GCGCGGGCGG GCGGCGCACT TGGCCTAA
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Protein sequence | MKEVGGILPT MPAKRATVRD LRRHNRSALL STLYFEGPLS RQELVARTGL SAATVSTATA GLVDERLVVG AGTVESDGGR PRSLLRVNPG YGHVVGVDVG ETGVAVELFD LALRRIAALD HDLPPTDPLA VGALIAAAVP EVIALAGADQ GSVLGVGIGV PGEVERRGGA WGAATLVHAQ TLGWSGVPLA ELVRAGGTTL PLFVENGAKT QGQAEMWFGA GRGSRHVVVA LLASGVGAAV VADGAVQRGS TSSAGEWGHT TVVHGGRRCR CGAHGCLEAY VGAGAVLERY RGLGGELGEG DERAAFAELV ALAGGGTLGG GSPPAGGAQL ATRVLEEAVG YLGAGIATLV NLFNPELIVL GGWAGAALGE GWLPSIVAAT REHALRHPFA RVRLEAGRLG PDAVAVGAAT LPVAALLERA ADPRAPVRGR AAHLA
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