Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1675 |
Symbol | |
ID | 8325860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1829213 |
End bp | 1830340 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644942225 |
Product | protein of unknown function DUF405 |
Protein accession | YP_003099470 |
Protein GI | 256375810 |
COG category | [S] Function unknown |
COG ID | [COG2311] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.965008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGCAG GACGGATCAG CGCGCTCGAC GTGCTGCGCG GTGCGGCGAT CCTGGGGACG CTCGGCACCA ACGTGTGGAT CTTCGCCTCG CCGGACGGGC CCGCGTCGTT CCTGAGCGGC GCGGGCTCGG TCGGGGAGGC GCTGCTGCGG GCGGTGACCA ACGGCAAGTT CCTGGGGCTG CTGTCGATCC TGTTCGGGAT CGGGGTCGCG CTCCAGCACC GGTCGGCGGT GCGGCGCGGG GAGCGGTGGC CCGGCTGGTA CCTGTGGCGG TCGGCGCTGC TGCTGCTCGA AGGGCTGCTG CACTACACGC TGCTGTTCGA GTTCGACGTG CTCATGTACT ACGCGGTGGT GTCCGCGGGC GTCGCGTACG TCGTCGGCCG GGGCGCGCGG TCGGTGCGGC GCTGGCTGAC CGGGACGCTG GTGGTGCACC TGCTCGTGGT GGCCGCGCTC ACCGCCGCGC TGGCGGCCTT CTCCGGTGAC GGCGGCGGTG GGGTCTCCGG GCTGCCCACC GACACGTCCA GCTGGCCCGC CCAGGTGGCG AACCGCTGGG ACCACGTCAC CGTCTACCGG GCGGAGGCGG TGCTCGCGAT CCCGCTCAGC GCCGTGCTGT TCCTGTCCGG GGCGCTGCTG CTGCAGGGCG GCGCGCTGGA GGACTCCGAG CGGGGACGCC GGACGCGCGC CCGCCTGATG GCCGTCGGCC TCGGCGCGGG CGTGCCGCTC AACCTCGCCA CCACCCTCCT CGGCGGCGCG CTGCCGCTGG TGGACCGGTA CGTGTGCGCG CCGATCGTCG CCTTCGGGCT GCTGGGGCTC ATCACGCACC TGGTGCTGCG CGCCAGGTCC GAGGCCGGAC GGCTGCGGCG CGGGGTCACG GCGGTCGGGC GCAGCGCGCT CAGCTGCTAC GTCGGGCAGA ACCTGATCGC GTCGATCCTG TGCTACGACT GGGGTTTCGG CCTCGCGAGC CGGTACGCGC ACCTGGGCGC GCCGTTCGTG GTGGCGGTGT GGCTGGTGGT GTCGGGGCTG CTGGTCGTGG GCGCGTCGTG GTGGATGGCG CGGTTCGAGC GCGGCCCGGT GGAGGAGCTG TGGAACCGCG CCCACCGCGC GCCGCAGCGG TTGTCGGCCC GGCGCTAG
|
Protein sequence | MGAGRISALD VLRGAAILGT LGTNVWIFAS PDGPASFLSG AGSVGEALLR AVTNGKFLGL LSILFGIGVA LQHRSAVRRG ERWPGWYLWR SALLLLEGLL HYTLLFEFDV LMYYAVVSAG VAYVVGRGAR SVRRWLTGTL VVHLLVVAAL TAALAAFSGD GGGGVSGLPT DTSSWPAQVA NRWDHVTVYR AEAVLAIPLS AVLFLSGALL LQGGALEDSE RGRRTRARLM AVGLGAGVPL NLATTLLGGA LPLVDRYVCA PIVAFGLLGL ITHLVLRARS EAGRLRRGVT AVGRSALSCY VGQNLIASIL CYDWGFGLAS RYAHLGAPFV VAVWLVVSGL LVVGASWWMA RFERGPVEEL WNRAHRAPQR LSARR
|
| |