Gene Amir_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1675 
Symbol 
ID8325860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1829213 
End bp1830340 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content74% 
IMG OID644942225 
Productprotein of unknown function DUF405 
Protein accessionYP_003099470 
Protein GI256375810 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.965008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCAG GACGGATCAG CGCGCTCGAC GTGCTGCGCG GTGCGGCGAT CCTGGGGACG 
CTCGGCACCA ACGTGTGGAT CTTCGCCTCG CCGGACGGGC CCGCGTCGTT CCTGAGCGGC
GCGGGCTCGG TCGGGGAGGC GCTGCTGCGG GCGGTGACCA ACGGCAAGTT CCTGGGGCTG
CTGTCGATCC TGTTCGGGAT CGGGGTCGCG CTCCAGCACC GGTCGGCGGT GCGGCGCGGG
GAGCGGTGGC CCGGCTGGTA CCTGTGGCGG TCGGCGCTGC TGCTGCTCGA AGGGCTGCTG
CACTACACGC TGCTGTTCGA GTTCGACGTG CTCATGTACT ACGCGGTGGT GTCCGCGGGC
GTCGCGTACG TCGTCGGCCG GGGCGCGCGG TCGGTGCGGC GCTGGCTGAC CGGGACGCTG
GTGGTGCACC TGCTCGTGGT GGCCGCGCTC ACCGCCGCGC TGGCGGCCTT CTCCGGTGAC
GGCGGCGGTG GGGTCTCCGG GCTGCCCACC GACACGTCCA GCTGGCCCGC CCAGGTGGCG
AACCGCTGGG ACCACGTCAC CGTCTACCGG GCGGAGGCGG TGCTCGCGAT CCCGCTCAGC
GCCGTGCTGT TCCTGTCCGG GGCGCTGCTG CTGCAGGGCG GCGCGCTGGA GGACTCCGAG
CGGGGACGCC GGACGCGCGC CCGCCTGATG GCCGTCGGCC TCGGCGCGGG CGTGCCGCTC
AACCTCGCCA CCACCCTCCT CGGCGGCGCG CTGCCGCTGG TGGACCGGTA CGTGTGCGCG
CCGATCGTCG CCTTCGGGCT GCTGGGGCTC ATCACGCACC TGGTGCTGCG CGCCAGGTCC
GAGGCCGGAC GGCTGCGGCG CGGGGTCACG GCGGTCGGGC GCAGCGCGCT CAGCTGCTAC
GTCGGGCAGA ACCTGATCGC GTCGATCCTG TGCTACGACT GGGGTTTCGG CCTCGCGAGC
CGGTACGCGC ACCTGGGCGC GCCGTTCGTG GTGGCGGTGT GGCTGGTGGT GTCGGGGCTG
CTGGTCGTGG GCGCGTCGTG GTGGATGGCG CGGTTCGAGC GCGGCCCGGT GGAGGAGCTG
TGGAACCGCG CCCACCGCGC GCCGCAGCGG TTGTCGGCCC GGCGCTAG
 
Protein sequence
MGAGRISALD VLRGAAILGT LGTNVWIFAS PDGPASFLSG AGSVGEALLR AVTNGKFLGL 
LSILFGIGVA LQHRSAVRRG ERWPGWYLWR SALLLLEGLL HYTLLFEFDV LMYYAVVSAG
VAYVVGRGAR SVRRWLTGTL VVHLLVVAAL TAALAAFSGD GGGGVSGLPT DTSSWPAQVA
NRWDHVTVYR AEAVLAIPLS AVLFLSGALL LQGGALEDSE RGRRTRARLM AVGLGAGVPL
NLATTLLGGA LPLVDRYVCA PIVAFGLLGL ITHLVLRARS EAGRLRRGVT AVGRSALSCY
VGQNLIASIL CYDWGFGLAS RYAHLGAPFV VAVWLVVSGL LVVGASWWMA RFERGPVEEL
WNRAHRAPQR LSARR