| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1674 |
|---|
| Symbol | |
|---|
| ID | 8325859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1827715 |
|---|
| End bp | 1828938 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644942224 |
|---|
| Product | urea ABC transporter, urea binding protein |
|---|
| Protein accession | YP_003099469 |
|---|
| Protein GI | 256375809 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGATCCA GAACCCTTCG ACGTGGTGCC GCAGCCCTCT TCCTCATCCC CCTGCTGGTC
GCCGGGTGCG TGAGCGATCC GACCGCCGGG GGCGCGTCCG GCGAGAGCGC GACCGAGATC
CGGGTGGGGG TGCTGCACTC GCTCAGCGGC ACGATGGCCA TCAGCGAGGT GACCGTCCGG
GACGCCGAGC TGCTGGCGGT CGAGCAGCTC AACGCCTCGG GCGGGGTGCT GGGCAAGAAG
CTGGTCCCGG TGGTGGAGGA CGGGGCGTCG GACTGGCCGA CGTTCGCCGA GAAGGCGCAG
AAGCTCATCT CGCAGGACCG GGTGGCCGCC GTGTTCGGGG GCTGGACCTC CGCGAGCCGC
AAGGCGATGC TGCCCGTGTT CGAGCGCAAC AAGGCGCTGC TGTGGTACCC GGTGCAGTAC
GAGGGGCTGG AGAGCTCGCC GTACATCTTC TACACCGGCG CGACCACGAA CCAGCAGATC
GTCCCGGCGC TGGACTACCT GGCGGCGCAG GGGAAGAAGA GCCTGTTCCT GGTGGGCAGC
GACTACGTGT TCCCGCGCAC CGCCAACAAG ATCATCAAGG CGTACGCGGC GGCGCGCGGC
ATCGAGGTGC TCGGCGAGGA GTACACGCCG CTGGGCCACA CCGAGTACAG CACCGTGGTC
AACAAGGTCG TCGACGCGCG GCCGGACGCG GTGTTCAACA CCCTCAACGG GGACAGCAAC
GTGGCGTTCT TCAAGCAGCT GCGCGGTTCC GGCGTCACCC CGGAGCGCAC GCCGGTGGTG
TCGGTGAGCG TCGCCGAGGA GGAGGTGCGC GGCATCGGGC CGGAGAACGT CGCGGGGCAC
CTGGTGGCGT GGAACTACTA CCAGACCACG GAAACCCAGG CCAACAGCGA GTTCGTCCGG
GCCTACCGGG CGAAGTACGG CGCCGACAAG GTCACCTCGG ACCCGATGGA GGCCGGGTAC
AACGCGGTGA AGCTGTGGGC GGCGGCGGTG ACGGCGGCCG GGACCACCGA GGTGGAGGCC
GTGCGCGAGG CCGCCGGTGG CATCGCCGTG GACGCGCCCG AGGGCCGCAC CACCATCGAC
GGGGCGACCC AGCACGTGGC CAAGACCGCG CGGATCGGCG TGGTGCGGCC GGACGGGCAG
ATCGAACAGG TGTGGGCCTC GGACGGCCCG ATCGCGCCGG ACCCGTACCT CAAGGGGTAC
CCGTGGGCCT CGGGGCTGGG CTGA
|
|---|
| Protein sequence | MRSRTLRRGA AALFLIPLLV AGCVSDPTAG GASGESATEI RVGVLHSLSG TMAISEVTVR
DAELLAVEQL NASGGVLGKK LVPVVEDGAS DWPTFAEKAQ KLISQDRVAA VFGGWTSASR
KAMLPVFERN KALLWYPVQY EGLESSPYIF YTGATTNQQI VPALDYLAAQ GKKSLFLVGS
DYVFPRTANK IIKAYAAARG IEVLGEEYTP LGHTEYSTVV NKVVDARPDA VFNTLNGDSN
VAFFKQLRGS GVTPERTPVV SVSVAEEEVR GIGPENVAGH LVAWNYYQTT ETQANSEFVR
AYRAKYGADK VTSDPMEAGY NAVKLWAAAV TAAGTTEVEA VREAAGGIAV DAPEGRTTID
GATQHVAKTA RIGVVRPDGQ IEQVWASDGP IAPDPYLKGY PWASGLG
|
|---|
| |