| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1672 |
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| Symbol | |
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| ID | 8325857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1825660 |
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| End bp | 1826838 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644942222 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_003099467 |
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| Protein GI | 256375807 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.569838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGTG GGGTTCAAGC GCGCCAAGGG CTCTCGCGGT TCGCGCTGCC GCTGTGCGTG
GTGCTGCTGG CGGTCGCCCC GCTGGTGCTG TCCCCGTTCC GGCTCGGGCT GCTGGCGAAG
TACCTGTGCT TCGCGATCGT CGCCGTGGGC ATCGCGGTGG CGTGGGGGCG CGGCGGGATG
CTCGTGCTGG GGCAGGGCGT GTTCTTCGGG CTCGGCGGCT ACGCCATGGG GATGCACCTG
TTGCTCGCCG AGGCCGGGGC CGCCGGGCTG CCGGACTTCA TGGTGTGGAG CGGGGTCGAG
GAGCTGCCCG CGCTGTGGGC GCCGTTCGCG AACCCGGTGT TCGCGCTCGC GGCCGTGGTG
GTGCTGCCCG GCGCGGTCGC GTTCTGCCTG GGGCTGCTGG TGTTCCGGCA GCGGGTGCGC
GGCGCGTACT TCGCGATCCT GTCCCAGGCG CTGGCCGCCG CGTTCGTGAT CCTGCTGGTC
GGGCGGCAGG GGGTGACCGG CGGGACGAAC GGGCTGACGA ACTTCGGCTC GTTCTTCGGG
CTGGACCTGG CCGACCCGGC CGGGCAGCGC GCCGTGTACT GGATCACCGC CGCCGCGCTG
GTGGTGGTGT TCCTGGTGGC GCGGTGGGTG GTGCGCGGGC CGTTCGGGCG GTTGCTGGTG
GCGGTGCGCG ACGGCGAGGA CCGGGTGCGG TTCCTCGGGT ACGACCCGGC GCTGGTGAAG
ACGCTGGTGT TCACCGGGTC GGCGGTGGCG GCGGGGATCG CGGGGGCGCT GTTCGTGCCG
GTCGTCGGGA TCATCTCGCC CGCGCTGCTC GGGGTGGCCC CCTCGCTGGA ACTGCTGGTG
GGGGTCGCGG TGGGCGGGCG GTTCTCGCTG GCGGGCGCGG TGGTCGGGGC GATCGCGGTG
AACTACGCGA AGACGGTGTT CAGCGAGGAC TTCGCGGAGG GCTGGCTGTA CCTGCAGGGC
GGGTTGTTCG TGCTGGTGCT GGTGTTCGCG CCGCGCGGGC TGGCCGGGCT GGTGGAGCGG
GGGCGGGAGT GGTGGGCGGC TCGGGCGGGT GGACGGGCCG GTGACGCGGG CGGTTCCGGC
GGCACAAGCG GTTCCGGTGA CGCGGGCGGT TCCGGCGGCG CGGGCGGTTC CGGTGGCGTG
ACGGGCGCCG GCTGGCGGAA CGAGGGGGTG GCCGGGTGA
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| Protein sequence | MSGGVQARQG LSRFALPLCV VLLAVAPLVL SPFRLGLLAK YLCFAIVAVG IAVAWGRGGM
LVLGQGVFFG LGGYAMGMHL LLAEAGAAGL PDFMVWSGVE ELPALWAPFA NPVFALAAVV
VLPGAVAFCL GLLVFRQRVR GAYFAILSQA LAAAFVILLV GRQGVTGGTN GLTNFGSFFG
LDLADPAGQR AVYWITAAAL VVVFLVARWV VRGPFGRLLV AVRDGEDRVR FLGYDPALVK
TLVFTGSAVA AGIAGALFVP VVGIISPALL GVAPSLELLV GVAVGGRFSL AGAVVGAIAV
NYAKTVFSED FAEGWLYLQG GLFVLVLVFA PRGLAGLVER GREWWAARAG GRAGDAGGSG
GTSGSGDAGG SGGAGGSGGV TGAGWRNEGV AG
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