Gene Amir_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1587 
Symbol 
ID8325771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1749176 
End bp1750561 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content74% 
IMG OID644942136 
Producthypothetical protein 
Protein accessionYP_003099382 
Protein GI256375722 
COG category[S] Function unknown 
COG ID[COG4320] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGC GCAAGCGGGC GTTGGCGGCC AAGGCGCTGG GGCGGTGGAC CGAGCCGGAC 
GAGGTGCGGG CGCGTGGCCG GGAGCTGCGC GCCACCACCG GTCCCGAGGC GCACCGGGAG
TTCGTCACGG CCCCGGACCG CCCCTCCGTC GTGGAGTACG TGACCGCCAC GAACGAGGGA
CGCCTGCCGA ACCTCGTGCC GCTGCGCCTC CAGCGGATGC TCGTCTCCCC GTTCGCGTTC
TTCCGGGGCA GCGCGGGCCT GATGGCGGGC GACCTGGCCG CCGGACCCCG CAGCGGGCCC
GTCGCGCAGC TGTGCGGCGA CGCGCACGCG GCCAACTTCG GGCTGTACGG CACGCCCGAG
GGCAAGATCG TCATGGACGT CAACGACTTC GACGAGACGC TCCCCGGCCC GTGGGAGTGG
GACCTCAAGC GCCTGGCCGC CTCGCTCGTG CTCGCCGGGC GCGAGGGCGG CGTGTCCGAG
AAGGGCTGCC GCGGCGCCGC CGAGGACGCG GTGCGCGCCT ACCGGGGCGC GGTCCGGCAC
CTCGCCGCCC TGCCGTTCCT GGAGTCCTGG AGCGCGCTCG GCGACGAGTC CGTGCTGTCC
AGGGCCAAGG CCGACGACCT CGGCGAGGAG TTCGCCAAGG CCGCAGCCAA GGCCCGCCGC
AACACCAGCG CCAAGGTCGC CGCCAAGTGG ACCACCCGCG AGGACGGGCA CTGGCGCTTC
GTCACCGACC CGCCCGTGCT CGACCGGGTC ACCGAGGACA CCGCCCGCGC CGTCGTGGAC
GCCCTGCCGT CCTACGTGGA CACCCTGCGC GAGTCCCGCT ACAACCTGAT CATGCGCTAC
GGCGTGTCCG ACGTGGCGTT CCGCGTCGTC GGCACCGGCA GCGTCGGGCT GCGCAGCTAC
CTGGTCCTGA TGCACGGCAA CGGCGACGAG GCGCTCGTGC TCCAGGTCAA GGAGGCCAGG
CCCTCCGCGC TCGCGCCGTT CCTCGGCCTG CCGCCCGCCA AGCACGAGGG CAAGCGGATC
GTGCACGGCG CCCGGCTCGT GCAGGCCGAG ACCGACATCC TGCTCGGCTG GACCACCGTG
CAGGGGCGGC CCTTCATCGT CCGGCAGTTC CGCAACCGCA AGGGCGAGAT CGACCCGACC
CTGCTGCGGC GCGCCGAGCT GGAGGACTAC GGCCGGTTCG CGGGCGCCCT GCTCGCCCGC
GCGCACAGCC GCTCCCTGGA CCCCAGGCTG CTCGACGGCT ACTTCACCGG CGCGGGGGAG
GAGTTCGACG AGGCCTTCGC AGGCTACGCC GTCGACTGCG CGGACCGCAC CCGTGCGGAC
CACGCCGAGT TCGTCCGGGC GGTCCACTCG GGGGTGTTCC CCTCCCTCGG CGTGGAACAC
GGGTAA
 
Protein sequence
MGERKRALAA KALGRWTEPD EVRARGRELR ATTGPEAHRE FVTAPDRPSV VEYVTATNEG 
RLPNLVPLRL QRMLVSPFAF FRGSAGLMAG DLAAGPRSGP VAQLCGDAHA ANFGLYGTPE
GKIVMDVNDF DETLPGPWEW DLKRLAASLV LAGREGGVSE KGCRGAAEDA VRAYRGAVRH
LAALPFLESW SALGDESVLS RAKADDLGEE FAKAAAKARR NTSAKVAAKW TTREDGHWRF
VTDPPVLDRV TEDTARAVVD ALPSYVDTLR ESRYNLIMRY GVSDVAFRVV GTGSVGLRSY
LVLMHGNGDE ALVLQVKEAR PSALAPFLGL PPAKHEGKRI VHGARLVQAE TDILLGWTTV
QGRPFIVRQF RNRKGEIDPT LLRRAELEDY GRFAGALLAR AHSRSLDPRL LDGYFTGAGE
EFDEAFAGYA VDCADRTRAD HAEFVRAVHS GVFPSLGVEH G