Gene Amir_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1580 
Symbol 
ID8325764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1741688 
End bp1742476 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content78% 
IMG OID644942129 
Productbifunctional deaminase-reductase domain protein 
Protein accessionYP_003099375 
Protein GI256375715 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGGA GCCTAACGCC GTGCTGGGAT GGGTCGGTGC AGAAGCTGTG GCCGGGGAGC 
GGCGCGGAGA GCAACATCAC GGACGCGGAG CTGGAGCGGC TCTACGACCA CCCGTCCGGG
CTCGACCGGC CGTGGGTGCA GGTGAACTTC GTGGCGAGCG CGGACGGCGC GATGACCGTG
GACGGCCGCT CGGGCGGGCT GGGCGGCGCG GCGGACCAGA AGGTGTTCGC GCTGGGCCGG
GACCTGGCCG ACGTGGTCCT GGTGGGCGCG GGCACCGCGG CGGCCGAGGG CTACCGGGGC
GTGGTCGCGG GGGCGGCGCG GGCCGAGCGG AGGGCCCGGC TGGGCCTGGC CCCGATCCCG
CCGATCGCGG TGGTGAGCGG CCGGTGCTCG CTGGAGCCGG ACTCGCCGCT GATCACGGAC
ACCCTCGTGC CGCCGATCGT GCTGACCACC TCGGAGGCCC CCGCCCGGCG GCGGGCGGAG
CTGACCGAGG CCGGGGCGGA CGTGGTGGTG GCGGGCGAGT CGTCGGTGCA CCCGGCGCTG
GCCCTGCGGG CGCTGGACGA GCGCGGCCTG CGCCGGGTGG ACTGCGAGGG CGGGCCCGCC
CTGTTCGCGT CGCTGATCGC GGCCGACCTG GTCGACGTGC TGTGCCTGAC CGTGGCGCCG
CTGCTGGTGG CGGGCGGGTC GGGCCGGATC GGCGCGGGCG TGCCGTCGGC GGTGCCGCGC
GGGCTGGAGC TGACCTCGGC GCTGCACGAC GAGGGGTACC TGATGCTCCG GTACGCGCGG
GCCCGGTAG
 
Protein sequence
MAGSLTPCWD GSVQKLWPGS GAESNITDAE LERLYDHPSG LDRPWVQVNF VASADGAMTV 
DGRSGGLGGA ADQKVFALGR DLADVVLVGA GTAAAEGYRG VVAGAARAER RARLGLAPIP
PIAVVSGRCS LEPDSPLITD TLVPPIVLTT SEAPARRRAE LTEAGADVVV AGESSVHPAL
ALRALDERGL RRVDCEGGPA LFASLIAADL VDVLCLTVAP LLVAGGSGRI GAGVPSAVPR
GLELTSALHD EGYLMLRYAR AR