| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1552 |
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| Symbol | |
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| ID | 8325736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1711422 |
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| End bp | 1712474 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644942102 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_003099348 |
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| Protein GI | 256375688 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGGCG AGATGACCGA GATGACCGAA CCCCCGCTGC TGGTCGCCGC GCGTGGCGGC
ACCCCGTCCC GGACCCCCGT GTGGTTCATG CGCCAGGCGG GCCGCTCGCT GCCCGAGTAC
CGGGCGCTGC GCGCGGGCAC GGCCATGCTG GACGCCTGCT TCGACCCGGA GATGGTCTGC
GAGATCACCA TGCAGCCGGT CCGCAGGCAC GACGTGGACG GCGCGATCCT CTTCTCCGAC
ATCGTCGTGC CGCTCAAGGC CGCCGGCGTC GACCTGGACA TCGTCGCAGG CACCGGGCCG
GTCGTGGCCT CCCCGGTCCG CACGCGCGAC GACGTCGCGG CCCTGCCGGA GCTGGAGGCC
GCGCACGTGC GGCCCGTGGC CGACGCCATC GGGCTGCTGC TGAAGGAGCT CGGGAACGTC
CCGCTGATCG GCTTCGCGGG CGCCCCGTTC ACCCTCGCCT CCTACCTCGT CGAGGGCGGT
CCGAGCCGCA ACCACGAGCG CACCAAGGCG CTCATGCACT CCGACCCCGA CCTGTGGCAC
GCGCTGCTGG CCAAGATCGC GGACATCACC GCCGAGTTCC TGCGCGTGCA GGTCGAGGCG
GGCGTCAAGG CCGTGCAGCT GTTCGACTCC TGGGCGGGCG CGCTGTCCGA GCGCGACTAC
CGGACCTTCG TCCTCCCGCA CTCCACGCGG GTGCTGGAGA GCATCACCGG CGTGCCGCGC
ATCCACTTCG GCGTCGGCAC CACCGAGCTG CTGCCCGCGA TGCGCGAGGC GGGCGCGGAC
GTCGTCGGCG TCGACTGGCG CACCCCGCTG GACGTCGCGG TGCGCCGCAT GGTCCAGGCC
GCGCCGGACC TGCCGCCGCC CGTCGTGCAG GGCAACCTCG ACCCGGCGCT GCTGTTCGCC
GGGATCCCCG CGCTGGAGCG CGAGGTCGAC CGGATCGTGG AGGAGGGAAA GGTGGCCTCC
GGGCACATCT TCAACCTGGG CCACGGCGTC CTCCCGGACA CCGACCCGGA CGTGATCACC
AAGGCCGTCG AGCTGGTGCA CCGGTCGCGA TGA
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| Protein sequence | MVGEMTEMTE PPLLVAARGG TPSRTPVWFM RQAGRSLPEY RALRAGTAML DACFDPEMVC
EITMQPVRRH DVDGAILFSD IVVPLKAAGV DLDIVAGTGP VVASPVRTRD DVAALPELEA
AHVRPVADAI GLLLKELGNV PLIGFAGAPF TLASYLVEGG PSRNHERTKA LMHSDPDLWH
ALLAKIADIT AEFLRVQVEA GVKAVQLFDS WAGALSERDY RTFVLPHSTR VLESITGVPR
IHFGVGTTEL LPAMREAGAD VVGVDWRTPL DVAVRRMVQA APDLPPPVVQ GNLDPALLFA
GIPALEREVD RIVEEGKVAS GHIFNLGHGV LPDTDPDVIT KAVELVHRSR
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