Gene Amir_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1550 
Symbol 
ID8325734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1709337 
End bp1710503 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content72% 
IMG OID644942100 
ProductMembrane dipeptidase 
Protein accessionYP_003099346 
Protein GI256375686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCCC TCCCCGCGCG TCTGCGCGCC GAAGAACTGC TGGCACGGGT GCCTCTGGTC 
GACGGGCACA ACGACCTCCC CTGGGCACTG CGCGACTTCG GCGCCGAAGG GCAAATCGGT
GAAAAGTCAA CGGGCGCCGA TCCGTGTGCC GCAGCCGACA CCGTCGACCT GACGGCTCAC
CAGCCCAGTC TCCAGACCGA CCTGGGGAGG CTGCGCGAGG GCCGGTTGGG GATGCAGTTC
TGGTCCGTGT GGGTCCCGTG CTCCCTGCCG GGTGACGCCG CCGTGGTCAC GACGGTGGAG
CAGGTCGACC TCGTCCACCG GTTGGCGCGG CGCTACCCCG ACCACCTGGC GATCGCCACC
ACCGCGGACG AGGCCGAGGC GGCGTTCGCC TCGGGGCGCG TGGCCTCGCT GATCGGGGCG
GAGGGCGGGC ACAGCATCAA CTCCTCGCTC GCCGTCCTGC GGGGGCTGCG CAGGCTGGGC
GTCCGGTACC TGACGCTGAC CCACAACGAG AACACCCCGT GGGCGGATTC GGCCACGGAT
GCACCCGTTA GCAATGGATT GACCCCGTTC GGGCGCGAGG TCGTCCGCGA GATGAACCGG
ATCGGCGTGA TCGTCGACCT CTCGCACGTC GCCGAGACGA CGATGAACGA CGCCCTCGAC
GTCACGACCA GGCCCGTCAT GTTCAGCCAC TCGTCCTGCC GGGCCGTGGC CGACCACCCG
AGGAACGTCC CGGACGCCGT CCTGGAGCGC CTGGCCGGGA ACGGGGGTGT GTGCATGGTC
ACATTCGTGC CCGCGTTCGT GTCCCCCGCC TACGCGGCCT GGGACGCCCG GCTGCGCGAG
GCCATGGCGG ACGCCGGGCA GCGGCACAAC GACCTGGACG CCAGGAACCG GTTCGCCGCG
ACGTGGACCG AGGGCGGGCC GACCCCGGAG GTCGGGATCG AGGACGTCGT GGCGCACGTC
GAGCACGCCC GCGAGGTCGC CGGGATCGAC CACATCGGGA TCGGCGGCGA CTACGACGGG
GTCGCGTTCC TGCCGAACGG GCTGGAGGAC GTGTCGGGGT ACCCGAACCT GTTCGCGGCG
CTGCTGGAGC GCGGGTGGAG CGAAGAGGAC TGCACGAAGC TCGCGGGCGC GAACGCGCTG
CGGGTGCTGC GCGCGAACGA CGAGTAG
 
Protein sequence
MAALPARLRA EELLARVPLV DGHNDLPWAL RDFGAEGQIG EKSTGADPCA AADTVDLTAH 
QPSLQTDLGR LREGRLGMQF WSVWVPCSLP GDAAVVTTVE QVDLVHRLAR RYPDHLAIAT
TADEAEAAFA SGRVASLIGA EGGHSINSSL AVLRGLRRLG VRYLTLTHNE NTPWADSATD
APVSNGLTPF GREVVREMNR IGVIVDLSHV AETTMNDALD VTTRPVMFSH SSCRAVADHP
RNVPDAVLER LAGNGGVCMV TFVPAFVSPA YAAWDARLRE AMADAGQRHN DLDARNRFAA
TWTEGGPTPE VGIEDVVAHV EHAREVAGID HIGIGGDYDG VAFLPNGLED VSGYPNLFAA
LLERGWSEED CTKLAGANAL RVLRANDE