| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1543 |
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| Symbol | |
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| ID | 8325727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1701157 |
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| End bp | 1703268 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644942093 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_003099339 |
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| Protein GI | 256375679 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCGT TGACCCCCGA CGAGGCCAAG GCGCTGTTCC CCGACGAAGT CGTCACCAGC
GCGCGCACCC GCCTGGTCGC GGTCCCCGGC CTGGACGGGC CGGTCGCCGT GATCACCATC
GACAACGGCC ACGACCACAC CCGCCCGTCG ACCTTCGGGC CGCAGGGCCT GGTCAGCCTG
GGCCTGGCGT TCGACGAGGC GGCGGCGGCG AACCCGGTGG CCATCGCGGT CACCGGCAAG
CCGTTCGTGT TCGCCGTCGG CGCCGACCTG AGCGCCGTGG AGAAGGCCGG GTCGCGCGAG
ACGGGCCTGA CCATCGGCGC GCTCGGCCAC GAGGTGTTCC GCAAGTTCAC CGACTCCACC
GTCCCCACCT TCGCGTTCGT CAACGGCGCG GCGATGGGCG GCGGCCTGGA GCTGGCGCTG
TCCTGCCACT ACCGGACGGT GTCCTCGAAC GCGGCGGCCA TCGCGCTGCC CGAGGTGTTC
CTCGGCCTGT TCCCCGGCTG GGGCGGCACG CAGCTGCTGC CGAACCTGAT CGGCCCGGAC
GCGGCCGTGA CGGTGATCTT CGAGAACGCG CTGAACCAGA ACCGGATGCT CAGCCCGGCG
AAGGCCACCC GGCTCGGGAT CTTCGACACC GCGCTCGACT CCGCCGACTA CCTGGAGCAG
TCGCTGCTCT GGCTGGCGAA GGTCGTGCGC GGCGAGGTGA CCCCGGAGCG CGAGGAGATC
GACCGGGGCG CCGGCTGGGA CGCCGCGCTC GCCCGCGCCA AGGGCATCGT GCACGGCCGC
ACCAAGGGCG CCGCGCCCGG CGCGCTCAAG GCCCTGGAGC TGCTGGAGCT GGCCCGCGAG
AACGACCTCG ACCGGGGTTA CGCGGCCGAG ACCGAGGCGC TGGCCGACCT GGTCATGAGC
GACGAGCTGC GGGCGGGCCT GTACTCGTTC AACCTCGTGC AGAAGCGCGC CAAGCGCCCC
GCGGGGGCCC CGGACAAGTC GCTGGCCCGC AAGGTCACCA AGGTCGGCAT CGTCGGCGCG
GGCCTGATGG CCTCGCAGAT GGCGCTGCTG TTCGCCCGAC GCCTGGAGGT GCCGGTCGTG
CTGACCGACG TCGACCAGGC GCGCGTGGAC AAGGGCGTGG GCTACGTGCA CGCCGAGGTC
GACAAGCTGC TGGGCAAGGG CCGGGTGTCG CAGGACAAGG CGAACCGGCT CAAGGCGCTG
GTGTCCGGCT CGCTGGACAA GGCGGCGTTC GCCGACGCGG ACTTCGTGAT CGAGGCCGTG
TTCGAGGACC TGGACGTCAA GAAGAAGGTC TTCGCCGAGG TCGAGGAGCA CGTCTCCGCC
GAGGCGGTGC TGGCCACCAA CACCTCGTCG CTGTCGATCA CCGACATGGC GTCCGGGCTG
AAGCACCCCG AGCGCGTGGT CGGCTTCCAC TTCTTCAACC CGGTCGCGGT CATGCCGCTG
CTGGAGATCG TGCGGGCCGA GCGGACCGAC GACGCGACCC TCGCGACGGC GTTCGCGGTG
GGCAAGCAGC TGAAGAAGTC GTCGGTGCTG GTCAAGGACG CGCCCGCGTT CGTGGTCAAC
CGGCTGCTGA CCCGGTTCAT GGGCGAGGTG GTGCGCTCGA TCGACGAGGG CACCCCGTTC
GAGGTGGCCG ACCGGGCGAC CGAGTCGCTG GGCCTGCCGA TGTCCCCGCT GGTGCTGCTG
CAGCTGGTCG GGCCGCCGGT GGCGCTGCAC GTGGCCGAGA CGATGCACGG GGCGTTCCCC
GAGCGGTTCG CGGTCAGCGA GAACATGAAG GCGTTCGTCG CGGCGGGCAA GGCGGCCGTG
TGGCAGTGGG ACGCGACCGG CAAGCAGACC GTGGACCCCG AGGTCCAGGC GCTCTGGAAG
GGCGGCGACG CCCCGCAGAC CGGCGAGGAG GTCGCCGCGC GGGCGCTGGA GGCGCTGGCC
GAGGAGATCC GCACCATGCT CGACGAGGGC GTGGTCGCGG AGGCGCAGGA CATCGACCTG
TGCATGATCC TGGGCGCGGG CTGGCCGTTC TGGCTGGGCG GCGTGACGCC GTACCTGGAC
CGGACGGGCA TCTCGGAGAA GGTGACCGGC AAGCGGTTCC TGGCTCCGGG CATCGCCTCC
GTCCCGGCCT GA
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| Protein sequence | MTALTPDEAK ALFPDEVVTS ARTRLVAVPG LDGPVAVITI DNGHDHTRPS TFGPQGLVSL
GLAFDEAAAA NPVAIAVTGK PFVFAVGADL SAVEKAGSRE TGLTIGALGH EVFRKFTDST
VPTFAFVNGA AMGGGLELAL SCHYRTVSSN AAAIALPEVF LGLFPGWGGT QLLPNLIGPD
AAVTVIFENA LNQNRMLSPA KATRLGIFDT ALDSADYLEQ SLLWLAKVVR GEVTPEREEI
DRGAGWDAAL ARAKGIVHGR TKGAAPGALK ALELLELARE NDLDRGYAAE TEALADLVMS
DELRAGLYSF NLVQKRAKRP AGAPDKSLAR KVTKVGIVGA GLMASQMALL FARRLEVPVV
LTDVDQARVD KGVGYVHAEV DKLLGKGRVS QDKANRLKAL VSGSLDKAAF ADADFVIEAV
FEDLDVKKKV FAEVEEHVSA EAVLATNTSS LSITDMASGL KHPERVVGFH FFNPVAVMPL
LEIVRAERTD DATLATAFAV GKQLKKSSVL VKDAPAFVVN RLLTRFMGEV VRSIDEGTPF
EVADRATESL GLPMSPLVLL QLVGPPVALH VAETMHGAFP ERFAVSENMK AFVAAGKAAV
WQWDATGKQT VDPEVQALWK GGDAPQTGEE VAARALEALA EEIRTMLDEG VVAEAQDIDL
CMILGAGWPF WLGGVTPYLD RTGISEKVTG KRFLAPGIAS VPA
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