Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1532 |
Symbol | |
ID | 8325716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1693937 |
End bp | 1695190 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644942083 |
Product | hypothetical protein |
Protein accession | YP_003099329 |
Protein GI | 256375669 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.180005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAACG GGGGGCACAA CTTCGACGCG ATGTCGCACA AAACGCTCTA CCAACTGCTG AACGACCGGA AGCACGGAGT CCCCGAGGCA GTCACCGAGG GGTGGAACGA GTTCGACCGC GTGCTCGGCG AGGCCACTTC CGAACTCGAC TCCGCCATCA GGGATTCCGG GGCGGTGTGG ATCGGCACTG CAGGCGAGGA GTTCAGGGCG TCCAACGCGC CGCTCGTGCA GTGGGCGCAG GAAGCACGAG AAGCGGGGGT CGCCACCCGC AGATCGTTCG AGGAGCACGT TTCCTGCTAC AACGCCGCAC GGCACAATAT GCCGAAACCG GTCCAGGTGA CCTCCACGGC GAACGACGAC TTCTGCGGGA TCCCCAGCAA GTTGATCCAC CTCGTCGGGG GGCAGACCGA CCAGGACATC CAGGAGCGGC TCGCGAACGA GGCCAAACGG GTTGCCGTGC GGGTCATGCA GAGCTACGGC GCAGGCACGG CCAGCGCGCT GGACGCGGTC GGTGACTTCG TCCCACCGCC CGCCATCACC ACTAGGGTCG ACGAGAGCCC CATAGCCCCG CCACCCCGTG TCCTGACCGC CAGCACTCCC CCGCCCCTGT TACCCAGCCA CCCGCTTCCG TTCCAGTCGC CACCGCAGCC TGAGCACCAC AGCGCCCCAG CCCTCACCAC ACCGCAGGGC ACCACGGAAA GCGCCTCAGC AACCCCCGCA GCGCCCCAGC AGGCGTCAAC ACCACCACTC ACCACAACAC CCTCGGCAAC ACCCCAGCAG CCCGCTCAGA GCTTCACCGT CCTCCCCGGC ATCGGCAGCA CCTCCCCGGC GGGCACAACG CTCACCACCG CCGCGGCCAG CCCCACGAGC ATCACCAGCC GCCTCAACCC CGGTCTCGGC AGCAGCGGCG CAGGCAGTGG ATCCCGCACC CTCTCGGGCC CTCCCCCCAT CGGCGGTCAC ACCGCCCCCG GAGGCCCCCA CGGGCCCGGT GGACCCGGTG GCGCGCACGG CGGAAGCCGC CCGGTCGTCA CCACCGGCGC ACCGCTCCCC ACCACACCGC AGCAGGCCAC CCGCCTCCCC GCCTCCGCCA CCCCGCCCCC GGCCGGGATG ACCGCCCTCC CCCCGAACGG CAGGTCGAGC GAGCACGACC AGCACCGCAG AACCGCCGCC TACCTCGAAG AGCACCGCGA CGTCTGGGGC GCCGACAGCA TCCCCAAGGT CAGCCCCCCG GTGATCGGAG ACGACCACCA GTGA
|
Protein sequence | MTNGGHNFDA MSHKTLYQLL NDRKHGVPEA VTEGWNEFDR VLGEATSELD SAIRDSGAVW IGTAGEEFRA SNAPLVQWAQ EAREAGVATR RSFEEHVSCY NAARHNMPKP VQVTSTANDD FCGIPSKLIH LVGGQTDQDI QERLANEAKR VAVRVMQSYG AGTASALDAV GDFVPPPAIT TRVDESPIAP PPRVLTASTP PPLLPSHPLP FQSPPQPEHH SAPALTTPQG TTESASATPA APQQASTPPL TTTPSATPQQ PAQSFTVLPG IGSTSPAGTT LTTAAASPTS ITSRLNPGLG SSGAGSGSRT LSGPPPIGGH TAPGGPHGPG GPGGAHGGSR PVVTTGAPLP TTPQQATRLP ASATPPPAGM TALPPNGRSS EHDQHRRTAA YLEEHRDVWG ADSIPKVSPP VIGDDHQ
|
| |