| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1505 |
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| Symbol | |
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| ID | 8325685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1662634 |
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| End bp | 1664124 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644942052 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003099302 |
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| Protein GI | 256375642 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.316264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGCG ACACCAGCCG CCCCGAGGCG GCGGACCCCG ATCCCCGCCC GCGTGAGGAC
CCGAGCATGA CCAACACCAC CGCGGAGAAG GCTGCCCCGG ACGGCGGCGC CATCTCCGAC
TTCGGCATCG ACACCACCTC CCGGTCCACC GGTGAGGCCG TCCGCGACTA CTTCGCGCGG
CTGCGCGGCG GCGAGCTCGG CTCGCTGCCC GCCCTCCTCG GGCTCGTCGT GCTGCTGATC
GTCTTCAGCT CGCTGTCCGA CTCCTTCCTG ACCCTGGGCA ACATCGCGAA CCTGCTCGCG
CAGGGCGCGG GCGTCACGAT CATCGCCATG GGCCTGGTGT TCGTGCTGCT CCTGGGCGAG
ATCGACCTGT CCGCGGGCAC CGCGTCCGGC GTCACGGCCT CGGTCATGGC GCTGCACCTG
GTCAAGGGCG GCAACCTCAT GGGCGGCATG GGGGACACGG TGTTCTACGT GTTCTGCGGC
CTGCTCGCGC TCGCCGTCGT GCTCGCCGTC CTCATGCGCA TCTGGGCGGG CGCCGTGCTC
TCCGCCGTCG CGCTGGCGAT CGCCGCGATC GGCGTGCCCG CCAACCCGTG GGTGGAGATG
CTGCTCGCGG TCTGCGTCGG CGCGGCCATC GGCTGCATCA CCGGCTTCCT GGTCGCCCGC
GTCGGCATCC CGTCGTTCGT GGTGACCCTG GCGCTGTTCC TGGCCTGGGG CGGCGTGATC
CTGCAGTTCA TCGGGCAGGG CGGCACGCTC GGCCTCAACG ACGACGTGCT GTTCAAGGTG
GCCAACGGCA ACCTCGACAC CACCGGCAGC TGGGTGCTGT TCGTGATCGC CGCGGGCGGG
TTCGCGGCCG TGGTGCTGGG CAAGCACTTC TCCCGGCTGC GCAGGGGACT CGTCGCGGGC
CCCACCCCGC TGGTGCTGGT CAGGGTCGGG CTGGTCGTCG TGCTCGGCGC CGCCGCCACC
TACGCGCTCA CCCTCAACCG CTCGGTCAGC GACCTGGTCG TCATCCAGGG CGTGCCGTAC
GTGGTGCCGA TCGTGCTGGT GCTTCTGGTG ATCGGCACGT TCGTGCTCGA CCGCACCCGC
TACGGCAGGC ACGTGTACGC GGTGGGCGGC AACCAGGAGG CGGCCCGGCG CGCGGGCATC
AACGTGCCGC AGATCCGGAT GAGCGTGTTC GTCATCGCCT CCAGCGCGGC GGCGATCGGC
GCGATCGTCT ACTCGTCCAA GGTCGGGTCC GTCGACCCGA ACGCGGGCGG CGGCAACACG
TTGCTACTGT CGGTCGGTGC GGCGGTCATC GGCGGTACCT CCCTCTTCGG CGGCAAGGGC
CGCCTGCGGG ACGCGGTCAT CGGCGGCGCC GTGCTCGCCA CCATCACCAA CGGCATGGGC
CTGCTCAAGC AGCCCGCGGC CGTGGTGTTC GTCGTGACCG GACTGGTCCT GCTGCTCGCC
GCGAGCGTCG ACGCGCTGTC CCGGCGCCGG GCGGCGGCGT CCCCGCGCTG A
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| Protein sequence | MASDTSRPEA ADPDPRPRED PSMTNTTAEK AAPDGGAISD FGIDTTSRST GEAVRDYFAR
LRGGELGSLP ALLGLVVLLI VFSSLSDSFL TLGNIANLLA QGAGVTIIAM GLVFVLLLGE
IDLSAGTASG VTASVMALHL VKGGNLMGGM GDTVFYVFCG LLALAVVLAV LMRIWAGAVL
SAVALAIAAI GVPANPWVEM LLAVCVGAAI GCITGFLVAR VGIPSFVVTL ALFLAWGGVI
LQFIGQGGTL GLNDDVLFKV ANGNLDTTGS WVLFVIAAGG FAAVVLGKHF SRLRRGLVAG
PTPLVLVRVG LVVVLGAAAT YALTLNRSVS DLVVIQGVPY VVPIVLVLLV IGTFVLDRTR
YGRHVYAVGG NQEAARRAGI NVPQIRMSVF VIASSAAAIG AIVYSSKVGS VDPNAGGGNT
LLLSVGAAVI GGTSLFGGKG RLRDAVIGGA VLATITNGMG LLKQPAAVVF VVTGLVLLLA
ASVDALSRRR AAASPR
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