| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1501 |
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| Symbol | |
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| ID | 8325681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1656429 |
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| End bp | 1657724 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644942048 |
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| Product | ribonuclease BN |
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| Protein accession | YP_003099298 |
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| Protein GI | 256375638 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.639318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGATC CCGAGATGGG TTCGCCTACT GGGCAGGATG ACCGCAGCGC GCCGGAGCGG
CGCCCCCTGC GGCTGGTCGC GCGCACGATC ACCAAGGCGT GGGAGGGCAA CATCTTCTCG
GAGGCCGCCG AGGCGGCCTT CTGGCAGGTG CTGTCGTTCC CGCCGCTGCT GCTGGGTCTG
CTCGGCAGCA TCGGCTACGT CGGCGAGTGG TTCGGACCCG AGGTGGTCCA AGCGGTGCGC
GACAAGATCG TCTCCACCTG CCGGACGATC TTCAGCGGTG ACGTCGTCAA CGGCGTGATC
ACACCCACGG TCGACCAGAT CCTGACGGTC GGCAAGGGCG AGATCGTGTC GGTCGGCTTC
CTGATATCCC TGTGGGCCGG GTCGTCGGCG ATGGCGTCCT TCGTGGACGC GGTCACCGTC
GCGCACGGTC AGTACGGGGT CAGGCACGAG GTGTGGCAGC GCATCTTCGC GCTGCTGCTG
TACGTGGTCA GCCTGGTGCT GCTGATCATC GGGCTGCCGG TGCTGGCGCT CGGGCCGGAC
GTGCTGCCCC GGTTCCTGCC GGACCGGTGG CAGGCCGTGG CCGAGGCGTG GCTGAGCGCG
TTCTACTACC CGGTGATCGG CGTGCTGCTC GTGCTGGCGC TCGCGACGCT GTACAAGCTC
GCGCTGCCCA GGAAGCTGCC GTGGCACCGG CTCGCGCCGG GCGCGGCGCT GGCGATGGTG
GTGTTCATCC TGTCGTCGGT CGGGCTGCGG CTGTACATCC GGTGGATCAC CACGACGGGC
TACACGTACG GGGCGCTGGC GACGCCGATC GCGTTCCTGC TGTTCGTGTT CTTCATCGGG
TTGGCGATCA CGATCGGGGC GTACTTCAAC AGCGCGATCC AGGAGATGTG GCCCGCGCGG
ATGACCCGGC GGCAGCGGCG GCGGTGGCGG CGGCTGGAAC TGGTGCGGGC GGCCGAGCGG
ATCATGAGCC GGGACGGCGG CGAGGCGGCC GACGACGCCG AGGAGCTGCG GGCGCGCGGC
ACGGGCCGGA AGGTCGCCGG GCGCGGCGGC AGCCGGGGCA AGGCCGCGGG GCAGGGCAAG
GCAGCCGGGC AGGGCAAGGC AGGCGGTCAG GGCGGCCACG GCGGTGGCAA GAGCGGCAAG
GGCGTGCGGC GGCGGGTCGC GGGCCGGGGT GGCAAGCGCG GCGGCACGAA GAGCGGCTCC
GGCGACCCGA AGCAGGGCGG CGACCCCGGC GGCACGGGCG GCGGTCCCGG CGACAAGGGC
GCGGCCGGGC GGACCGGTCA GCCGGAGAAC GCCTGA
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| Protein sequence | MLDPEMGSPT GQDDRSAPER RPLRLVARTI TKAWEGNIFS EAAEAAFWQV LSFPPLLLGL
LGSIGYVGEW FGPEVVQAVR DKIVSTCRTI FSGDVVNGVI TPTVDQILTV GKGEIVSVGF
LISLWAGSSA MASFVDAVTV AHGQYGVRHE VWQRIFALLL YVVSLVLLII GLPVLALGPD
VLPRFLPDRW QAVAEAWLSA FYYPVIGVLL VLALATLYKL ALPRKLPWHR LAPGAALAMV
VFILSSVGLR LYIRWITTTG YTYGALATPI AFLLFVFFIG LAITIGAYFN SAIQEMWPAR
MTRRQRRRWR RLELVRAAER IMSRDGGEAA DDAEELRARG TGRKVAGRGG SRGKAAGQGK
AAGQGKAGGQ GGHGGGKSGK GVRRRVAGRG GKRGGTKSGS GDPKQGGDPG GTGGGPGDKG
AAGRTGQPEN A
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