| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1493 |
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| Symbol | |
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| ID | 8325673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1649131 |
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| End bp | 1650123 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644942040 |
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| Product | RNA polymerase sigma factor SigB |
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| Protein accession | YP_003099290 |
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| Protein GI | 256375630 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.499176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCC CGAAGGTCCT CGACCGCGAG GTCGGGAACG ACACGAGTGC CCCGAGCGTC
GACTTGGACC TCGACGCCCA GGGACCGGCC GCCGACCTGG TCCGGGTCTA CTTGAACGGG
ATCGGGAAGA CAGCGCTGCT CACGGCCGCC CAAGAGGTGG AGCTGGCCAA GCGGATCGAG
GCGGGCGTCT TCGCGCACCA CGTGCTGGAG ACGACCACCG CGCTGAACGC GGGGCGCGCC
GACGAGCTGC GCGCCCTGGT CCGCGACGGC CTCAGGGCGA AGAACCACCT GCTGGAGGCG
AATCTCCGGC TGGTCGTTTC TCTGGCGAAG CGGTACACCG GTCGTGGAAT GCCTCTGCTC
GACCTGATCC AGGAGGGCAA CCTGGGTCTG ATCCGCGCGG TCGAGAAGTT CGACTACACC
AAGGGTTTCA AGTTCTCCAC GTACGCCACG TGGTGGATTC GCCAGGCGAT CACCAGGGGA
ATGGCAGATC AGGGCCGCAC GATCCGCCTT CCGGTCCACT TGGTGGAACA GGTGAACAAG
CTCGCGCGGA TCAAGCGGGA TCTGCACCAG CAACTCGGCC GAGAGGCGAC GAACGAGGAA
CTGGCCGCCG AATCCGGCCT TTCCCCGACG AAGGTCTCGG ACCTGCTCGA CCACGCGCGC
GACCCGGTGA GCCTGGACAT GCCGGTGGGC GCCGAGGAGG ACGCGCCGCT CGGTGACTTC
ATCGAGGACT CGGACGCGAC CGACGCCGAG AGCGCCGTGA TCTCCGGGCT GCTGCAGGAC
GACCTGCGCC GCGTGCTGGC CACGCTGGAG CAGCGCGAGC AGGCGGTGAT CCGGCTGCGC
TACGGCCTGG AGGACGGGCA GCCGCGCACG CTGGACCAGA TCGGCAAGCA GTTCGGGCTG
TCGCGGGAGC GGGTGCGGCA GATCGAGCGC GAGGTGATGT CCAAGCTGCG TCAGGGGGAA
AGGGCCGCCA AGCTGCGCGC TTACGCGAGC TGA
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| Protein sequence | MTVPKVLDRE VGNDTSAPSV DLDLDAQGPA ADLVRVYLNG IGKTALLTAA QEVELAKRIE
AGVFAHHVLE TTTALNAGRA DELRALVRDG LRAKNHLLEA NLRLVVSLAK RYTGRGMPLL
DLIQEGNLGL IRAVEKFDYT KGFKFSTYAT WWIRQAITRG MADQGRTIRL PVHLVEQVNK
LARIKRDLHQ QLGREATNEE LAAESGLSPT KVSDLLDHAR DPVSLDMPVG AEEDAPLGDF
IEDSDATDAE SAVISGLLQD DLRRVLATLE QREQAVIRLR YGLEDGQPRT LDQIGKQFGL
SRERVRQIER EVMSKLRQGE RAAKLRAYAS
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