| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1485 |
|---|
| Symbol | |
|---|
| ID | 8325665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1640581 |
|---|
| End bp | 1641405 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644942032 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003099282 |
|---|
| Protein GI | 256375622 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCGCAC GGATCCTGAT CACCGGCGCG GCGGGCATCG TCGGCTCGCT GATGCGCCCC
CGGTTGGCCG CGCCCGGCCG AGTGCTGCGC CTGCTCGACG TCGCCGAGCA GCGCCCCGCC
GAGGACGGTG AGGAGGTCGA GCTGGTGACC GCCTCGGTGA CCGACCTGGA GGCGGTGGAA
CGGGCCTGCG AGGGCGTGGA CGCCGTGATC CACCTCGGCG GGCACAGCCT GGAGCGGCCG
TGGGCGGAGA TCCTGGAGGT GAACATCAAC GGCACGCACG CGGTGCTGGA GGCCGCCAGG
CGGGCGGGCG TGAAGCGCGT GGTGCTGGCC AGCTCGAACC ACGCGGTGGG GTTCTACGAG
CGGGCGTCCG GCGAGGCCGG TGACGCGCTG TTCCCGCAGC CGGACAGCTA CTACGGCGTG
AGCAAGGCGG CCCTGGAGGC GCTGGGGTCG ATGTACTCGG CGCGGTACGG GCTGGACGTG
ATCGCGATCC GGATCGGGTC GTGCTTCGAG AAGCCGCGCG ACGTGCGGAT GCTGTCGACG
TGGCTGTCCC CGGACGACGG GGCGCGGCTG TTCGAGGCGT GCCTGTCGGC GCCGTCGCCG
GGCTTCCGGG TGGTGTGGGG CGTCTCGGAC AACACCCGGC GGTGGTTCTC GCTGGAGGCG
GCGCGGGAGC TGGGGTACGT GTCCGAGGAC GACTCCGAGG TGTTCGCGGC GGAGGTGATC
GCCCAGCACG GCGAGCCGGA CCCGGAGTCG TTGGCGCTGA AGTACCTGGG CGGTGTGTGG
GTCGGTCCGG ACTTCGACAC GGCGGTTCAG GAGGCGGGCC GGTGA
|
|---|
| Protein sequence | MTARILITGA AGIVGSLMRP RLAAPGRVLR LLDVAEQRPA EDGEEVELVT ASVTDLEAVE
RACEGVDAVI HLGGHSLERP WAEILEVNIN GTHAVLEAAR RAGVKRVVLA SSNHAVGFYE
RASGEAGDAL FPQPDSYYGV SKAALEALGS MYSARYGLDV IAIRIGSCFE KPRDVRMLST
WLSPDDGARL FEACLSAPSP GFRVVWGVSD NTRRWFSLEA ARELGYVSED DSEVFAAEVI
AQHGEPDPES LALKYLGGVW VGPDFDTAVQ EAGR
|
|---|
| |