Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1471 |
Symbol | |
ID | 8325651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1626252 |
End bp | 1627025 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644942018 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003099268 |
Protein GI | 256375608 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.461855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCAGCT CCCACCCCTC CCCCGGCCGC CGGGCCGACA AGCCCGTCCG CGCCGGGATT CCCGAGCACG GGCGGGTTCC CCGCTACTAC GCGGTCAAGA CCGAGCTGCT GTGGCTGGTC GAGGCGCTGG GGGAGGGGGC GGCGCTGCCG TCGGAGCGGG AGCTGGCCTG CCGGTTCTCG GTCTCGCGCG TGACGCTGCG CCAGGCCGTC GCGGAGCTCG TCCTGGAGGG CAGGCTCCTG CGGCGGCACG GCAGCGGCAC CTACGTCGCG CCGCCCAAGC TCGTGCAGCC GCTGTCCCTG GTGAGCTACG CGGACGGGAT GCGGGCGCAG GGCATCCGGC CCGACCGGGG CGTGGTGACC GTCGAGCGGT TACCCGCGGA CGAGGTGCTC GCCGAGGACC TGCTGGTGCC GCACGGGGAC CCGGTGCTGC ACCTGGAGCG GGTCATGCTC GCCGACGGCG CGCGGGTCGG CCTGGAGTCG ACGTACCTGC CGCTGTCCCG CTTCCCCGGC CTGCTCGACG CGCTCGACCC GGCCGGGTCG CTGCACGCCT GCCTGCGCGA GCGGTTCGGC GTGGAGTTCG GCGGGGCCGA GGAGCGGGTG GAGACCGTGC TGGCGGCGCC CCGCGAGGCG CTGCTCATCG GCACCAACCC CGCGCTGCCC ATGCTGCTGC TGCACCGGGT CGCGCACGAC CGGTCCGGAA CGCCGGTGGA GCGCTCGCGC TCGCTGTACC GGGGCGACCG CTACAGCCTC GCCGCGAGGG TGCGCGCCGA GTAG
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Protein sequence | MISSHPSPGR RADKPVRAGI PEHGRVPRYY AVKTELLWLV EALGEGAALP SERELACRFS VSRVTLRQAV AELVLEGRLL RRHGSGTYVA PPKLVQPLSL VSYADGMRAQ GIRPDRGVVT VERLPADEVL AEDLLVPHGD PVLHLERVML ADGARVGLES TYLPLSRFPG LLDALDPAGS LHACLRERFG VEFGGAEERV ETVLAAPREA LLIGTNPALP MLLLHRVAHD RSGTPVERSR SLYRGDRYSL AARVRAE
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