| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1468 |
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| Symbol | |
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| ID | 8325648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1621190 |
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| End bp | 1622383 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644942015 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_003099265 |
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| Protein GI | 256375605 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0799038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGCGG AACAGGGCGT CGCGCGGCCA CCCGCCGTGG TCTGGGACGA GTCGGTGCTC
GCCTACGACC TCGGCGGCGA CCACCCGCTC AACCCCGTGC GCCTTGACCT CACCGTCCGG
CTCGCCACGG CGCTCGGCGT CCTCGACGGC GTCGACCCGA TCGCCCCGGC CCACGCCACC
GACCCGGAGC TCGAACGCGT CCACGACCCC GCCTACCTGG CCGCCGTGCG CGCCGCCCCG
AGCACCGCCT GGGACCTCGG CCACGGCCTC GGCACCACCG ACAACCCGGT CTTCGACCGG
ATGCACGAGG CGTCCTCCCT GATCGTCGGC GGCTCGCTCG CCGCAGCCCG CCAGATCGCC
TCCGGCGCCG CCGACCGGGC CGTCAGCATC GCGGGCGGAC TGCACCACGC CATGCGCGAC
CGCGCCGCGG GCTTCTGCGT CTACAACGAC TGCGCCGTCG CCATCTCCTG GCTGCTGGAC
AACGGCTTCG ACCGCGTCGC CTACGTCGAC ACCGACGTGC ACCACGGCGA CGGCGTGCAG
GCCGCGTTCT ACGACGACCC GCGCGTGCTC ACCGTCTCCC TGCACCAGAG CCCGCTGAGC
CTGTGGCCCG GCACCGGCCG CCCCGCCGAG CTGGGCGGTC CGAACGCCGA GGGCACGGCG
GTCAACGTCG CCCTCCCGCC CGGCACCCCC GACCGGGGCT GGCTGCGCGC CTTCCACGCC
GTCGTGCCGT CGCTGCTCAC CGCGTTCCGC CCGCAGGTCC TGGTCACCCA GTGCGGAGTG
GACAGCCACC GCGAGGACCC GCTCGCCGAC CTGTCCCTGA CCGTCGACGG CCACCGCGCG
ATCTACCGCG CCCTGCGCCA CCTCGCCGAC ACCACCGCGA ACGGCAAGTG GCTGGCGCTC
GGCGGCGGCG GGTACGAGCT GGTGCGCGTG GTCCCCCGCT CCTGGACGCA CCTGCTCGCC
ACGGTCCTGG ACCGCGACGT CGACCCGCGC GTCCCGCTGC CCGCCTCCTG GATCTCGCAC
GTGGCCAGGA CCGCCCCGAA CTGGCCGCTG CCCACCACCA TGACCGAGGG CGCCGACACC
TCGTTCGCGC CGTGGGACGG CTCCGGCGGC GACCCGGTGG ACGAGGCCGT CCGGGCCACC
CGCCGCGCCG TCTTCCCCCT GCACGGCCTG GACCCCGAGG ACGCGAGGGA CTAG
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| Protein sequence | MGAEQGVARP PAVVWDESVL AYDLGGDHPL NPVRLDLTVR LATALGVLDG VDPIAPAHAT
DPELERVHDP AYLAAVRAAP STAWDLGHGL GTTDNPVFDR MHEASSLIVG GSLAAARQIA
SGAADRAVSI AGGLHHAMRD RAAGFCVYND CAVAISWLLD NGFDRVAYVD TDVHHGDGVQ
AAFYDDPRVL TVSLHQSPLS LWPGTGRPAE LGGPNAEGTA VNVALPPGTP DRGWLRAFHA
VVPSLLTAFR PQVLVTQCGV DSHREDPLAD LSLTVDGHRA IYRALRHLAD TTANGKWLAL
GGGGYELVRV VPRSWTHLLA TVLDRDVDPR VPLPASWISH VARTAPNWPL PTTMTEGADT
SFAPWDGSGG DPVDEAVRAT RRAVFPLHGL DPEDARD
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