Gene Amir_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1465 
Symbol 
ID8325645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1618346 
End bp1619038 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content70% 
IMG OID644942012 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_003099262 
Protein GI256375602 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00556833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGACC TCATCGACAC CACGGAGATG TACCTCCGCA CGATCTACGA GCTCGAAGAA 
GAGGGCGTGG TGCCGCTGCG CGCCCGCATC GCCGAGCGGC TGGGCCAGAG CGGCCCGACC 
GTGAGCCAGA CCGTCGGCCG CATGGAGCGG GACGGGCTGG TGGTCGTCGC CGACGACCGG 
CACCTGGAGC TGACCGAGCA GGGCCGCAAC CTCGCGGTGT CGGTGATGCG CAAGCACCGG 
CTGGCGGAGC GGCTGCTGGT CGACATCATC GGCCTGGAGT GGGAGCACGT GCACAGCGAG 
GCATGTCGCT GGGAGCACGT GATGAGCGAG GCCGTCGAGC GCAAGCTGGT GAAGCTGCTC 
GGCAACCCGA CCACCTCGCC CTACGGCAAC CCCATCCCCG GCCTGGACAA GCTCGGCGAC 
GGCGAGCCCG CTCCGCCCGT GGAGGCGGAC CTGCTGCGCA TCGACGAGGT CGCCAGGCGC 
GGCGGGGGCC GGGTGGAGGT CAAGCGGATC GCCGAGCACG TTCAGCTCGA CCCCGATCTG 
ATGGCGGATC TGAAAGCTGC GGGTGTGATG CCGGGAAGTG TTGTGAAGGT CGAGTCGCTG 
GACGACAGCA AGGTCGTGCG GGTCGGCGGG AGTGGGACGA CGGCCGAGCT GAGCCAGTCC 
ATCGCCCACG CCGTGCTGGT GCAGGCCAGG TGA
 
Protein sequence
MNDLIDTTEM YLRTIYELEE EGVVPLRARI AERLGQSGPT VSQTVGRMER DGLVVVADDR 
HLELTEQGRN LAVSVMRKHR LAERLLVDII GLEWEHVHSE ACRWEHVMSE AVERKLVKLL 
GNPTTSPYGN PIPGLDKLGD GEPAPPVEAD LLRIDEVARR GGGRVEVKRI AEHVQLDPDL 
MADLKAAGVM PGSVVKVESL DDSKVVRVGG SGTTAELSQS IAHAVLVQAR