Gene Amir_1425 details

Gene Information

• Locus tag: Amir_1425
• ID: 8325605
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1575022
• End bp: 1575783
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644941973
• Product: putative integral membrane protein
• Protein accession: YP_003099223
• Protein GI: 256375563

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGGCGC GGATCGAACA GCGCACGCTC CGCACGGACC GCTGGTGGTT GCCCCCGCTG 
GCGACGGCGG CGGCCCTGCT GCTGATCTCC GCCTACGCGG CGGTGCGCAC CTTCATGGGC 
GACTACTACT GGGTCGACGA CTACCACTAC CTGACGCCCA TGTACTCGCC GTGCCTGAGC 
CAGGAGTGCT TACCCGAGGC CGCGCACTTC GGCAGGCCGC TGCCCGAGCT GCCCGGCTTC 
CTGACCCCGC CCGTGGTGAT CCTGCCGTTC CTGCTGGGCT TCCGGGTCAC CTGCTACTAC 
TACCGCAAGG CCTACTACCG GGCCGCCTGG CTGTCCCCGC CCGCCTGCGC CGTCGCCGAG 
CCGCACGCCC GCTACACCGG CGAGACCCGG TTCCCGCTGA TCGCGCAGAA CCTGCACCGG 
TACTTCTTCC TCGCCGCGTC GGTCCTGCTG CTGGTCAACA CCTACGACGC GCTCGCCGCG 
CTCACCACGG GCCTGGGCCT GGGCAACATC ATCCTGCTGG TCAACGTGAC CCTGTTGGGC 
GCGTACACCC TGTCCTGCCA CTCGTGCAGG CACATCGCGG GCGGCAGGCT CAAGCACTTC 
TCCCGGCACC CCGTGCGCTA CCGGATGTGG ACGCTGGTCT CCAGGCTCAA CGCCAGGCAC 
ATGCTCCTGG CCTGGGCGTC GCTGGTCTTC GTCTGCCTGA CCGACCTCTA CATCGCGCTG 
GTCTCGGCCG GCGTCGTCAG CGACCTCAGG TTCATCGGCT GA 

 

Protein sequence

MRARIEQRTL RTDRWWLPPL ATAAALLLIS AYAAVRTFMG DYYWVDDYHY LTPMYSPCLS 
QECLPEAAHF GRPLPELPGF LTPPVVILPF LLGFRVTCYY YRKAYYRAAW LSPPACAVAE 
PHARYTGETR FPLIAQNLHR YFFLAASVLL LVNTYDALAA LTTGLGLGNI ILLVNVTLLG 
AYTLSCHSCR HIAGGRLKHF SRHPVRYRMW TLVSRLNARH MLLAWASLVF VCLTDLYIAL 
VSAGVVSDLR FIG