| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1413 |
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| Symbol | |
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| ID | 8325593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1559384 |
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| End bp | 1564204 |
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| Gene Length | 4821 bp |
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| Protein Length | 1606 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644941961 |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_003099211 |
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| Protein GI | 256375551 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0176402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACCG CTTTCTCACC GGCGACCAGG CAGTGGTTCG CCGGTGCTTT CGCCGCGCCG
ACGGCCGCGC AGGCCGGGGC GTGGGAGGCC GCTGCCGCCG GGGAGAACGC GCTGGTCATC
GCCCCGACCG GGTCGGGCAA GACGCTGGCC GCGTTCCTCT GGGCGCTGGA CCGGCTGGCG
CAGGAACCGC CCCCGGACGA GCCGCGCGAG CGGTGCCGGG TGCTGTACGT GTCGCCGCTG
AAGGCGCTGG CGGTGGACGT GGAGCGCAAC CTGCGGGCGC CCCTCGCGGG CATCCGGCAG
GCCTCGCGCA GGCTGGGGCT GCCGGAGCCC GCCATCGAGG TGGGGATGCG GACCGGGGAC
ACGCCCGCCG ACGTGCGCAG GGCGTTCGCG CGCAAGCCGC CGGACGTGCT GGTCACCACG
CCGGAGTCGC TGTTCCTGGT GCTCACCTCG GCCGCGCGGG AGTCGTTGCG CGGGGTGCGG
ACGGTGATCC TGGACGAGGT GCACGCGGTG GCGGGCACGA AGCGCGGCGC GCACCTGGCG
CTGTCGCTGG AGCGGTTGGA CGGGCTGCTG GAGCGGCCCG CGCAGCGGAT CGGGCTGTCG
GCGACGGTGC GGCCGGTGGA GGAGGTGTCG GCCTTCCTCG CGGGCGGGCG GCCGGTGCGG
GTGGTGCAGC CGGAGTCGGC CAAGACGATC GAGGTGCGGG TCGAGGTCCC GGTCGAGGAC
ATGTCGGCGC TCGGGGAGCC GACCGGCGAG GTGAGCGGGT CGGCTGCGGG TGGTGAGCGG
CGGACGTCGA TCTGGCCCGC GGTGGAGCAG CGGGTGCTGG AGCTGGTGCG GGAGCACCGG
TCGACGATCG TGTTCGCCAA CTCGCGCAGG CTGGCGGAGC GGTTGACGGC GCGGCTCAAC
GAGCTGGCGG CCGAGGCGGC CGAGGGCGGC GGGCCCGGTG CGGACGGTCC CGGTGCGGAC
GGGTTGGGGG AAGGCGCCGG TCAGGGCGGG TCCGGCTCGG CGGTGGCGCG GTTCCCCGCG
GCGGCGGTCG GCCAGTCGGG GGTGACGGTC CAGGAGGGGC CGGTGATCGC CCGCGCCCAC
CACGGGTCGA TGTCGCGCGA GCAGCGCACG TCCGTGGAGG AGGAGCTGAA GTCGGGGCGG
CTGCCGTGCG TGGTGGCGAC GTCCTCGCTG GAGCTGGGCA TCGACATGGG CGCGGTGGAC
CTGGTGGTGC AGGTGGAGGC GCCGCCCACG GTCGCGTCGG GGTTGCAGCG GGTCGGCCGG
GCCGGGCACC AGGTGGGCGC GGTGTCGCGC GGGGTGGTGT TCCCCAAGTT CCGGGGCGAC
CTGGTGTCGT GCGCGGTGGT GGCCGAGCGG ATGCGGGACG GCGCGATCGA GGCGGTGCGG
TACCCGCGCA ACCCGCTCGA CGTGCTGGCG CAGCACGTGG TGGCGATGGT CGCGCTGGAG
CCGTGGTCGG TGGAGGACCT GGCGCGGGTG GTGCGCGGGG CGGCGCCGTT CGCCGGGCTG
CCCGAGTCGG CGCTGCTGGC GGTGCTGGAC ATGCTCGCGG GCCGGTACCC GAGCGAGGAG
TTCGGCGAGC TGCGGCCGAG GATCACCTGG GACCGGGTGA CCGGGGAGCT GCGCGGGCGG
CCGGGCGCGC AGCGGCTCGC GGTGACGTCC GGCGGCACGA TCCCGGACCG GGGGCTGTTC
GCGGTGATGA CCCCGGCCTC GGAGTCCAAG CCGGGCTCGC GGGTGGGCGA GCTGGACGAG
GAGATGGTCT ACGAGTCGCG GGTGGGCGAC ACGTTCCTGC TGGGCACCTC GTCGTGGCGG
GTCGAGGACA TCACCCACGA CCGCGTGGTC GTGGTGCCCG CGCCCGGTCA GCCCGCGCGG
ATGCCGTTCT GGAAGGGCGA CGCGCCGGGG AGGCCGCTGG AGCTGGGGCG GGCGCTCGGG
CGGTTCCTGC GGGAGGTGTC GGCGCTGCCC GAGCCCGAGG CGGTGGGGCG CGCCGCGGCG
GCCGGGCTGG ACGAGTGGGC CACGGCGAAC CTGCTGACCT ACCTGAAGGA GCAGCGCGAG
GCGACCGGGC ACGTGCCGAG CGACCGGGCG GTGCTGGTGG AGCGGTTCCG CGACGAGCTG
GGCGACTGGC GGCTCGTGGT GCACTCGCCG TTCGGGGCGC AGGTCAACGC GCCGTGGGCG
CTGGCGATCG GGGCGCGGCT GCGGGAGCGG CGCGGGGTGG ACGCGCAGGT GGCGCACTCG
GACGACGGGA TCGTGGTGCG GCTGCCGGAC GCGGTGGACG CCGAGGGCGG GCAGGCCGTG
GCGGGCGCGG AGGACGTGCT GCTCGACCCG GACGAGGTGG AGCAGGTCGT GGTCGCCGAG
GTGGGCGGGT CGGCGCTGTT CGCGGCCAGG TTCCGGGAGT GCGCGGCCCG CTCGCTGCTG
CTGCCCCGGC GCGACCCGAG GCGGCGCACC CCGCTGTGGC AGCAGCGGCA GCGGGCGGCG
CAGCTGCTGT CGGTCGCCTC GAAGTACGAG AGCTTCCCGG TGGTGCTGGA GGCGATGCGG
GAGTGCCTGC AGGACGTGTA CGACGTGCCG GGGCTGCGGG AGCTGATGGC CGACGTGCGG
GCCAGGCGGG TGCGCGTGGT GGAGGTGGAG ACGCCGTCGC CGTCGCCGTT CGCGCGGAGC
CTGCTGTTCG GGTACGTCGG GATGTTCCTG TACGAGGCGG ACACCCCGCT GGCCGAGCGG
CGGGCGGCGG CGCTGTCGCT GGACTCGGCG CTGCTGGCGG AGCTGCTGGG GTCGGAGGCG
ATCCGGGAGC TGCTCGACCC GGAGGTGCTG GAGGAGGTCG AGCGGGCGCT GCAGCGGCTC
GCGCCCGACC GGCACGCGCG GGACGCCGAG GGGGCGGCCG ACCTGCTGCG GTTCCTCGGC
GACCTGTCCG AGGAGGAGGC CGCCGAGCGG GGCGTGCGGC CGGAGTGGCT GACCGAGCTG
GTGGCGGCGC GGCGGGCGAT CCGGGTGCGG ATCGCGGGCC ACGAGCGGGT GATCACGATC
GAGGACGCCG GACGGGTGCG GGACGCGCTG GGCGTCGCGC TGCCGGTGGG CGTGCCCGAG
GTGTTCACCG AGCCGGTGGC CGATCCGCTC GGCGACCTGC TGGGCCGGTA CGCGCGCACG
CACGGGCCGT TCCCTGCGGG GCAGGCGGCG GAGCGGTTCG GGCTCGGGGT GGCCGTGGTG
ACCGGGGTGC TGGAGCGGAT GGCCGCGACG GGGCGGCTGG TGCGCGGGGA GCTGCGGCCT
GGTGGCACGC ACACCGAGTA CTGCGACGCG GAGGTGCTGC GGCGGTTGCG CAGGTCGTCG
CTGGCGCGGC TGCGCTCCGA GGTGGAGCCG GTGGAGCCCG CCGCGCTGGG CCGGTTCCTG
CCGGGCTGGC ACGGCGTCGG CAGGCGGGTG CGCGGGGCCC CGACCGCGGA CGACGTGTAC
GCGGTGGTGG AGCAGCTGGC GGGCGCGCCG CTGCCCGCGA GCGCGGTCGA GTCGCTGCTG
CTGCCCGCCC GGTTGCCCGG CTACCACCCG GCGCTGCTGG ACGAGCTGAC CGCGGCGGGC
GAGGTGACCT GGACTGGGTG CGGGGCGCTG GCGGGCGGCG ACGGCTGGGT GGCGCTGGCC
CCGACCGACG TGGCGGACCT GCTGCTGCCG GACCTGGTCC CGGAGTCGGC GCCGGAGTCG
CCGCTGCACA CGGCCGTGGT GGAGGCGCTG GCGGGCGGGG CGCTGTTCTT CCGGCAGGTG
GTGGACCGGG TGGCGCTGCA GGGCCCGACG ACCGACCAAG AGGTGGTCGG CGCGCTGTGG
GACCTGGTGT GGGCGGGCCT GGTCACGAAC GACACCCTGG CCCCGCTGCG CGCGCTGGTG
TCGGGCGGAG GCGCGCACAA GCCGAAGCGC ACGACGCCGA GGGGCCGCTA CGCCCGGATG
CGCGCGACCC GCCCGGACAT GCCCAGCCGA ACCGGTCCGC CAACGGTGGC GGGCCGCTGG
TCGCTGGCGG TGGTGCCGTC GCCGGACCCG ACGCGCAGGG CGCACGCGCG GGCGGAGGCG
TTCCTGGAGC GCCACGGCGT GCTGACCAGG GGCGCGCTGG ACACCGAGCG GGTGACCGGC
GGGTTCAGCG CGGTGTACCG GGTGCTGCGC GCGATGGAGG AGTCGGGCCA GGTGGTGCGC
GGCTACGTGG TCGAGGGCCT GGGCGCGGCG CAGTTCGCGG CACGGGGCGC GGTGGACCGG
CTGCGCGCTT TGTCGGCCCC ACCGGACCGG ACGGGGTCGG AGTGGGCGGG GCCGGAACCG
AACTGGTCGG CGGGATCTGC CGGGTCCGCC GGTTCGGTGG GGTCTGCCGG GTCCGCCGGT
TCGGTGGGGT CTGCCGGGTC CGCCGGTTCG GTGGGGTCTG CCGGTTCAGC TGGATTCTCC
GGTCCGGCGG GGTTCACCGG TTCGGCGGAG TGGGGCGGTC CGGTGCGGTC GGCGGGTTCG
GCGGGGTCCG GGCCTACCAC CGTGGTGCTG GCGGCGGCGG ATCCGGCGCA GCCGTACGGG
GCGGCGCTGT CGTGGCCGGA GCAGGTTGGT GGCGGCAAGC ACCGGCCGGG GCGCAAGGCG
GGGGCGTTGG CCGTGCTCGT CGACGGGGAG GCCGTGCTGT ACGTCGAGCG GGGTGGGAAG
TCGCTGCTGT CGTTCACCGA GGAGGACGAG CCCTTGCGTG CCGCGGCGCA GGGGTTGGGC
CGGGCGGTGC GCGACGGGTG GCTCGGGCAG TTGTCCGTGC AGCGGGCGGA TGGGGAGGTG
GCATTGGGTT CGAAGTTGGC GGGTGTGCTC CAGGAAGCGG GGTTCCGGGC GACTCCGAAG
GGACTTCGGC TGCGAGCCTG A
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| Protein sequence | MTTAFSPATR QWFAGAFAAP TAAQAGAWEA AAAGENALVI APTGSGKTLA AFLWALDRLA
QEPPPDEPRE RCRVLYVSPL KALAVDVERN LRAPLAGIRQ ASRRLGLPEP AIEVGMRTGD
TPADVRRAFA RKPPDVLVTT PESLFLVLTS AARESLRGVR TVILDEVHAV AGTKRGAHLA
LSLERLDGLL ERPAQRIGLS ATVRPVEEVS AFLAGGRPVR VVQPESAKTI EVRVEVPVED
MSALGEPTGE VSGSAAGGER RTSIWPAVEQ RVLELVREHR STIVFANSRR LAERLTARLN
ELAAEAAEGG GPGADGPGAD GLGEGAGQGG SGSAVARFPA AAVGQSGVTV QEGPVIARAH
HGSMSREQRT SVEEELKSGR LPCVVATSSL ELGIDMGAVD LVVQVEAPPT VASGLQRVGR
AGHQVGAVSR GVVFPKFRGD LVSCAVVAER MRDGAIEAVR YPRNPLDVLA QHVVAMVALE
PWSVEDLARV VRGAAPFAGL PESALLAVLD MLAGRYPSEE FGELRPRITW DRVTGELRGR
PGAQRLAVTS GGTIPDRGLF AVMTPASESK PGSRVGELDE EMVYESRVGD TFLLGTSSWR
VEDITHDRVV VVPAPGQPAR MPFWKGDAPG RPLELGRALG RFLREVSALP EPEAVGRAAA
AGLDEWATAN LLTYLKEQRE ATGHVPSDRA VLVERFRDEL GDWRLVVHSP FGAQVNAPWA
LAIGARLRER RGVDAQVAHS DDGIVVRLPD AVDAEGGQAV AGAEDVLLDP DEVEQVVVAE
VGGSALFAAR FRECAARSLL LPRRDPRRRT PLWQQRQRAA QLLSVASKYE SFPVVLEAMR
ECLQDVYDVP GLRELMADVR ARRVRVVEVE TPSPSPFARS LLFGYVGMFL YEADTPLAER
RAAALSLDSA LLAELLGSEA IRELLDPEVL EEVERALQRL APDRHARDAE GAADLLRFLG
DLSEEEAAER GVRPEWLTEL VAARRAIRVR IAGHERVITI EDAGRVRDAL GVALPVGVPE
VFTEPVADPL GDLLGRYART HGPFPAGQAA ERFGLGVAVV TGVLERMAAT GRLVRGELRP
GGTHTEYCDA EVLRRLRRSS LARLRSEVEP VEPAALGRFL PGWHGVGRRV RGAPTADDVY
AVVEQLAGAP LPASAVESLL LPARLPGYHP ALLDELTAAG EVTWTGCGAL AGGDGWVALA
PTDVADLLLP DLVPESAPES PLHTAVVEAL AGGALFFRQV VDRVALQGPT TDQEVVGALW
DLVWAGLVTN DTLAPLRALV SGGGAHKPKR TTPRGRYARM RATRPDMPSR TGPPTVAGRW
SLAVVPSPDP TRRAHARAEA FLERHGVLTR GALDTERVTG GFSAVYRVLR AMEESGQVVR
GYVVEGLGAA QFAARGAVDR LRALSAPPDR TGSEWAGPEP NWSAGSAGSA GSVGSAGSAG
SVGSAGSAGS VGSAGSAGFS GPAGFTGSAE WGGPVRSAGS AGSGPTTVVL AAADPAQPYG
AALSWPEQVG GGKHRPGRKA GALAVLVDGE AVLYVERGGK SLLSFTEEDE PLRAAAQGLG
RAVRDGWLGQ LSVQRADGEV ALGSKLAGVL QEAGFRATPK GLRLRA
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