Gene Amir_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1407 
Symbol 
ID8325587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1553143 
End bp1553646 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content78% 
IMG OID644941955 
ProductYbaK/prolyl-tRNA synthetase associated region 
Protein accessionYP_003099205 
Protein GI256375545 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCAC CCCACGACCA CCCCGGCATC GCCAAGGTCG CCGCAGTGCT GGACGAGTCA 
GGCCACTCCG ATTCCGCGCG GGGCATCCGC GTGCTCGCGG GCGCGGTCCG CACCGCCGCC 
GAGGCCGCCG AGGCGGTCGG CGTCCCGGTG GGCGCGATCG CCAACAGCCT GGTCTTCGCC 
GCCGTCACCG GCGGCGTCGC CGCCCCGCTG CTCGCGCTGA CGTCGGGCGC GCACCGCGCC 
GACACCGCGC TGCTGGCGGA GCTGGTCGGC GCGGACTCGG TCGAGCGGGC CACCCCGGCG 
TTCGTCCGCG AGCACACCGG CCAGGTCATC GGCGGGGTCG CGCCCGTCGG GCACCCGGCG 
CCGCTGCGGA CCCTCGTGGA CGTGGCGCTG CGGGAGCACG AACAGGTGTG GGCGGCGGCG 
GGGCACCCGC ACGCGGTCTT CCCCACGACG TTCGAGGCCC TGGTCGAGCT GACCGGCGGC 
ACCCCCGCCG AGGTGGCCCG GTGA
 
Protein sequence
MSAPHDHPGI AKVAAVLDES GHSDSARGIR VLAGAVRTAA EAAEAVGVPV GAIANSLVFA 
AVTGGVAAPL LALTSGAHRA DTALLAELVG ADSVERATPA FVREHTGQVI GGVAPVGHPA 
PLRTLVDVAL REHEQVWAAA GHPHAVFPTT FEALVELTGG TPAEVAR