Gene Amir_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1404 
Symbol 
ID8325584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1550030 
End bp1551709 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content74% 
IMG OID644941952 
Productprotein of unknown function DUF885 
Protein accessionYP_003099202 
Protein GI256375542 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCGA CCTCCGCAGG TGTGCACGCG GTCAGCAACC GCTACGTCGC CGACTACGCA 
GCCGCCGACC CGCTCATGGC CACCCAGAGC GGCATCCCCG GTCACGACGA CCGGCTGACC
GACTACTCCC CGCAGGGCCA CGCCGCCCGC GAGGAGCTGA CCCGCCGCGC CGCGCGCGAG
ATCGAGGCCG CCGAGCCCGC CGACGCCTCC GAGGCCGTCG CGAAGGCGGT CTTCCTGGAG
CGCACCTCCG TCGACCTGGA CCTCTACGAC GCGGGCGCCC ACCAGGCCGA CCTGAACGTC
ATCGCCAGCC CCGTGCAGGG CCTGCGCGAG ACCTTCGACC TGATGCCCAC CGCCACCACC
GAGGACTGGG CGGTCATCGC CAAGCGCCTC GCCGCCCTGC CCGAGGCCGT CGCGAACCTG
CGCGCGGGCC TCGGCCACTC CGCCGACGCG GGCCGGGTCG CCGCGCTGCG CCAGGTCACC
AAGGTCGCCG AGCAGTGCGA CACCTGGTCG GGTCGCACCA CCGGCCGCTC GTTCTTCGCC
GACCTGATCG CGCCCGCCCC CGACGACCGG GCGCTGCGCA CCGAGCTGGA GGCCGGGGCG
CGCGCGGCGG GCGAGGCGTA CGCCGACCTC GCCCAGTTCC TGCGCGCCGA GCTCGCCCCC
AAGGCCCCGA CCAAGGACGC CGTCGGCGAG GAGGCGTACC GGCTCAAGTC GCGCTTCTTC
ACCGGCGCGA AGCTCGACCT GGCCGAGGCG TACGCCTGGG GCTGGGAGGA GTTCTCCGGC
ATCGAGGCCG AGATGCGCGA GGTCGCGGGC CGCATCAAGC CCGGCGCGAC GATCGCCGAG
GCCGCCGCCG CGCTCGACGC CGACCCGCGC TACCGGGTGA CCGGCCAGGA CGGGCTGCGG
CAGTGGATGC AGGGGCTCTC CGACGCGGCG CTCGCCGACG TGCGCGGCAA GCACTTCGAC
CTGCCCGACG AGCTGATGGA CCTGGAGTGC CGGATCGCCC CGCCCGGCGG CGGCGTCGGC
GCGTACTACA CCAGCCCCAC CCCGGACTTC TCCCGCCCCG GCCGCATGTG GTGGTCCGTG
CCCGCCGACC GGCAGGAGTT CTCCACCTGG CGCGAGGTCA GCACCGTCTA CCACGAGGGC
GTCCCCGGCC ACCACCTGCA GATCGCCACG GCCGTCTACC AGGCCGAGAA GCTCAACGAC
TTCCAGCGCC TGATGTGCTG GATCTCCGGC CACGGCGAGG GCTGGGCGCT GTACGCCGAG
CGGCTCATGC GCGAGCTGGG CTACCTCGGC GACCCCGGCG ACCTGCTCGG GATGCTGGAC
TCGCACCTGT TCCGCGCCGC CCGCGTGATC GTCGACATCG GGATGCACCT GGAGCTGGAG
ATCCCGAAGG GCACCGGCTT CCACGAGGGC GAGCGGTGGA CGCCGGAGCT GGGCCTGGAG
TTCATGCTCA CCCGCACCAT CACCGACCCC GCGCACGTGC ACGACGAGAT CGACCGCTAC
CTCGGCTGGC CCGGCCAGGC CCCCGCCTAC AAGCTCGGCG AGCGGCTGTG GCTGGCCGCC
CGCGAGGACG CCCGCGCCCG GCACGGGGCC GCGTTCGACC TCAAGCGGTT CCACCAGGAG
GCGCTGGAGA TGGGCTGCAT GGGCCTGGAC ACGCTCCGCG AGCGGCTCGC CGCCCTCTGA
 
Protein sequence
MSSTSAGVHA VSNRYVADYA AADPLMATQS GIPGHDDRLT DYSPQGHAAR EELTRRAARE 
IEAAEPADAS EAVAKAVFLE RTSVDLDLYD AGAHQADLNV IASPVQGLRE TFDLMPTATT
EDWAVIAKRL AALPEAVANL RAGLGHSADA GRVAALRQVT KVAEQCDTWS GRTTGRSFFA
DLIAPAPDDR ALRTELEAGA RAAGEAYADL AQFLRAELAP KAPTKDAVGE EAYRLKSRFF
TGAKLDLAEA YAWGWEEFSG IEAEMREVAG RIKPGATIAE AAAALDADPR YRVTGQDGLR
QWMQGLSDAA LADVRGKHFD LPDELMDLEC RIAPPGGGVG AYYTSPTPDF SRPGRMWWSV
PADRQEFSTW REVSTVYHEG VPGHHLQIAT AVYQAEKLND FQRLMCWISG HGEGWALYAE
RLMRELGYLG DPGDLLGMLD SHLFRAARVI VDIGMHLELE IPKGTGFHEG ERWTPELGLE
FMLTRTITDP AHVHDEIDRY LGWPGQAPAY KLGERLWLAA REDARARHGA AFDLKRFHQE
ALEMGCMGLD TLRERLAAL