Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1404 |
Symbol | |
ID | 8325584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1550030 |
End bp | 1551709 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941952 |
Product | protein of unknown function DUF885 |
Protein accession | YP_003099202 |
Protein GI | 256375542 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATCGA CCTCCGCAGG TGTGCACGCG GTCAGCAACC GCTACGTCGC CGACTACGCA GCCGCCGACC CGCTCATGGC CACCCAGAGC GGCATCCCCG GTCACGACGA CCGGCTGACC GACTACTCCC CGCAGGGCCA CGCCGCCCGC GAGGAGCTGA CCCGCCGCGC CGCGCGCGAG ATCGAGGCCG CCGAGCCCGC CGACGCCTCC GAGGCCGTCG CGAAGGCGGT CTTCCTGGAG CGCACCTCCG TCGACCTGGA CCTCTACGAC GCGGGCGCCC ACCAGGCCGA CCTGAACGTC ATCGCCAGCC CCGTGCAGGG CCTGCGCGAG ACCTTCGACC TGATGCCCAC CGCCACCACC GAGGACTGGG CGGTCATCGC CAAGCGCCTC GCCGCCCTGC CCGAGGCCGT CGCGAACCTG CGCGCGGGCC TCGGCCACTC CGCCGACGCG GGCCGGGTCG CCGCGCTGCG CCAGGTCACC AAGGTCGCCG AGCAGTGCGA CACCTGGTCG GGTCGCACCA CCGGCCGCTC GTTCTTCGCC GACCTGATCG CGCCCGCCCC CGACGACCGG GCGCTGCGCA CCGAGCTGGA GGCCGGGGCG CGCGCGGCGG GCGAGGCGTA CGCCGACCTC GCCCAGTTCC TGCGCGCCGA GCTCGCCCCC AAGGCCCCGA CCAAGGACGC CGTCGGCGAG GAGGCGTACC GGCTCAAGTC GCGCTTCTTC ACCGGCGCGA AGCTCGACCT GGCCGAGGCG TACGCCTGGG GCTGGGAGGA GTTCTCCGGC ATCGAGGCCG AGATGCGCGA GGTCGCGGGC CGCATCAAGC CCGGCGCGAC GATCGCCGAG GCCGCCGCCG CGCTCGACGC CGACCCGCGC TACCGGGTGA CCGGCCAGGA CGGGCTGCGG CAGTGGATGC AGGGGCTCTC CGACGCGGCG CTCGCCGACG TGCGCGGCAA GCACTTCGAC CTGCCCGACG AGCTGATGGA CCTGGAGTGC CGGATCGCCC CGCCCGGCGG CGGCGTCGGC GCGTACTACA CCAGCCCCAC CCCGGACTTC TCCCGCCCCG GCCGCATGTG GTGGTCCGTG CCCGCCGACC GGCAGGAGTT CTCCACCTGG CGCGAGGTCA GCACCGTCTA CCACGAGGGC GTCCCCGGCC ACCACCTGCA GATCGCCACG GCCGTCTACC AGGCCGAGAA GCTCAACGAC TTCCAGCGCC TGATGTGCTG GATCTCCGGC CACGGCGAGG GCTGGGCGCT GTACGCCGAG CGGCTCATGC GCGAGCTGGG CTACCTCGGC GACCCCGGCG ACCTGCTCGG GATGCTGGAC TCGCACCTGT TCCGCGCCGC CCGCGTGATC GTCGACATCG GGATGCACCT GGAGCTGGAG ATCCCGAAGG GCACCGGCTT CCACGAGGGC GAGCGGTGGA CGCCGGAGCT GGGCCTGGAG TTCATGCTCA CCCGCACCAT CACCGACCCC GCGCACGTGC ACGACGAGAT CGACCGCTAC CTCGGCTGGC CCGGCCAGGC CCCCGCCTAC AAGCTCGGCG AGCGGCTGTG GCTGGCCGCC CGCGAGGACG CCCGCGCCCG GCACGGGGCC GCGTTCGACC TCAAGCGGTT CCACCAGGAG GCGCTGGAGA TGGGCTGCAT GGGCCTGGAC ACGCTCCGCG AGCGGCTCGC CGCCCTCTGA
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Protein sequence | MSSTSAGVHA VSNRYVADYA AADPLMATQS GIPGHDDRLT DYSPQGHAAR EELTRRAARE IEAAEPADAS EAVAKAVFLE RTSVDLDLYD AGAHQADLNV IASPVQGLRE TFDLMPTATT EDWAVIAKRL AALPEAVANL RAGLGHSADA GRVAALRQVT KVAEQCDTWS GRTTGRSFFA DLIAPAPDDR ALRTELEAGA RAAGEAYADL AQFLRAELAP KAPTKDAVGE EAYRLKSRFF TGAKLDLAEA YAWGWEEFSG IEAEMREVAG RIKPGATIAE AAAALDADPR YRVTGQDGLR QWMQGLSDAA LADVRGKHFD LPDELMDLEC RIAPPGGGVG AYYTSPTPDF SRPGRMWWSV PADRQEFSTW REVSTVYHEG VPGHHLQIAT AVYQAEKLND FQRLMCWISG HGEGWALYAE RLMRELGYLG DPGDLLGMLD SHLFRAARVI VDIGMHLELE IPKGTGFHEG ERWTPELGLE FMLTRTITDP AHVHDEIDRY LGWPGQAPAY KLGERLWLAA REDARARHGA AFDLKRFHQE ALEMGCMGLD TLRERLAAL
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