| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1399 |
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| Symbol | |
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| ID | 8325579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1545067 |
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| End bp | 1546575 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644941947 |
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| Product | phytoene desaturase |
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| Protein accession | YP_003099197 |
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| Protein GI | 256375537 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGCTGG TCACCGGGCG GACCGACCAC GTCGTGGTGG TCGGGGCGGG GCTGGCCGGG
CTCTCGGCCG CCCTGCACCT GCTGGGCGCG GGTCGCCGCG TCACCGTCGT CGAGCGCGAC
GCCACCCCCG GCGGTCGCGC CGGGCGGCTC GCGCTGGGCG GCTTCACCGC CGACACCGGC
CCGAGCGTGC TGACCATGCC GGAGCTGGTC GAGGAGGCGT TCAACGCGGT CGGCGGGAGC
ATGGCCGACC GCCTGGACCT GCGGCCGGTC ACCCCGGCCT ACCGGGCGCG CTTCGCCGAC
GGCTCGGTGC TGGACGTGCA CCCCGACGCC GAGGCCATGG AGGCCGAGGT GCGCCGGTTC
GCGGGCCCCG AGCAGGCGCG CGGGTACCTG CGGCTGCGGG CGTGGCTGAC CGAGCTGCAC
CGGGTCGAGC GGGACGCGTT CATCGGCGCG AACTTCGACT CGCCGCTGGA CCTGCTCACC
CCGCAGCTGG CCAGGCTGGC GTCGCTGCGC GGGTTCGCCA GGCTCGACCC GACGGTGGGC
CGGTTCGTCA CCGACGAGCG GCTGCGCCGG GTGTTCACGT TCCAGTCGCT GTACGCCGGG
CTCGCGCCGC GCAAGGCCAT GGCCGCCTAC GCGGTGATCG CCTACATGGA CGCGATCGCG
GGCGTGCACC ACCCGCGCGG CGGGGTGCGG GCGCTGCCCG ACGCGCTGGC CGCCGCAGCC
GCCGACGCGG GCGCGGACCT GCGGTTCGAC ACGCGGGTGG CGTGGCTGGA GCGGATCGGC
GGGCGGGTCA CGGCGGTGCG CACCGCGCAC GGCGAGCGGA TCGCGTGCGA CGCGGTCGTG
CTCACCCCGG ACCTGCCGGT GTCCTACCGC CTGCTGGGGC ACCGGCCGCG CAGGCTGCTG
CCGGTGCGCT GGTCGCCGTC GGCGGTGGTG CTGCACGCGG GCACCCGCGG GCGCTGGGAC
GAGCTGGCCC ACCACACGAT CTTCTTCGGC GACGCCTGGG AGCGCACGTT CGACGAGGTC
ATCGACCGGG GGCAGCTGAT GAGCGACCCG TCGCTGCTGG TCAGCAGGCC GCCGGAGGAG
GACGCGGCGA CGTTCGTGCT GGCGCCCGCG CCGAACCTGC GGGCGGGGCG GATCGACTGG
GAGCGGGTCG GGCCCGCCTA CCGGGACGAG CTGGTGGCGG AGCTGGAGCG GCGCGGGCTG
ACCGGGTTCG GCGACTCGAT CGAGGTCGAG CGCCTGGTGA CGCCGAAGGA CTGGGCCGCG
CTGGGCATGG CGGCGGGCAC GCCGTTCTCG GCGGCGCACA CCTTCGCCCA GACCGGGCCG
TTCCGGCCGA GGAACCTGGT GTCCGGGGTG GAGAACGCGG TCCTGGCGGG CTGCGGCACC
ACGCCGGGCG TGGGCGTGCC GCCGGTGCTG GTGTCCGGGA GGCTGGCCGC GCAGCGGATC
ACCGGGGTGG CCGCGCCGGT GGGCAGGCGC CCGGTGGCGG GGCTGCTGGC GCGGGTCTCC
CGGCGCTGA
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| Protein sequence | MRLVTGRTDH VVVVGAGLAG LSAALHLLGA GRRVTVVERD ATPGGRAGRL ALGGFTADTG
PSVLTMPELV EEAFNAVGGS MADRLDLRPV TPAYRARFAD GSVLDVHPDA EAMEAEVRRF
AGPEQARGYL RLRAWLTELH RVERDAFIGA NFDSPLDLLT PQLARLASLR GFARLDPTVG
RFVTDERLRR VFTFQSLYAG LAPRKAMAAY AVIAYMDAIA GVHHPRGGVR ALPDALAAAA
ADAGADLRFD TRVAWLERIG GRVTAVRTAH GERIACDAVV LTPDLPVSYR LLGHRPRRLL
PVRWSPSAVV LHAGTRGRWD ELAHHTIFFG DAWERTFDEV IDRGQLMSDP SLLVSRPPEE
DAATFVLAPA PNLRAGRIDW ERVGPAYRDE LVAELERRGL TGFGDSIEVE RLVTPKDWAA
LGMAAGTPFS AAHTFAQTGP FRPRNLVSGV ENAVLAGCGT TPGVGVPPVL VSGRLAAQRI
TGVAAPVGRR PVAGLLARVS RR
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