Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1378 |
Symbol | |
ID | 8325558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1519203 |
End bp | 1520939 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941926 |
Product | hypothetical protein |
Protein accession | YP_003099176 |
Protein GI | 256375516 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGGGG TTACCGTGCC CGGAATGCCG ACCACGCCGC CCGCGCAGCT GTCGTTCGAC GAGCTGGGCA CCCCGCTGCG GGAGACCACG TTCGTCGTCT TCGACCTGGA GACGACCGGT CCGCGCGCGG CCGAGGACGG CATCACCGAG ATCGGCGCGG TGAAGGTGCG CGGCGGGCGG GTGATCGGCG AGTTCGGCAC GCTCGTCGAC CCGGAGCGCG GCATCCCGCC GCAGATCGTC GCGCTGACCG GCATCACCCA GAACATGGTG ACCGGCGCGC CCGTGCTCGC CTCGGTGCTG CCCGCGTTCC TGGAGTTCGC CGAGGGCGCG GTGCTGGTGG CGCACAACTC CGGGTTCGAC GTGGGGTTCA TGAAGGCCGC CTGCGAGCGG CACGGCTACG CCTGGCCCAA GCCGCCGGTG GTGTGCACGG TCAAGCTGGC CAGGCGGGTG CTCAGCCGCG AGGAGGCGCC CAGCTGCAAG CTGTCCGCGC TGTCCGCCCT GTTCGGGGTG CCCGAGGCGC CGAACCACCG GGCGCTGGTC GACGCCCGCG CCACCGTGGA GGTGCTGCAC CGGCTGCTGG AGCGGGTCGG GTCGGTGGGC GTGCACTCGC TGGAGGAGCT GCTGGCGTAC CTGCCGGACG TGAGCCCGCA GCAGCGCCGC AAGCGCTCGC TGGCCGCCGA CCTGCCGTCC GCGCCGGGCG TGTACCTGTT CCGGGGGCCC AGCGAGGAGG TGCTGTACGT CGGCACGGCC TCGGACCTGC GCAGGCGGGT GCGGCAGTAC TTCACCGCCT CCGAGACCCG GCACCGGCTG CGCGAGATGG TGGCCCTGGC GGTGCGGGTG GACTGGGTGG AGTGCGCGCA CCCGCTGGAG GCGCAGGTGC GGGAGCTGCG GCTGATCGCC GCGCACCGGC CCGCCTACAA CCGCCGGTCG AAGAACACCG CCTCCTGGTG GCTGGCGCTG ACCGACGAGG CGTTCCCGAG GCTCTCGGTG GTGCGGACGG CCCGCGAGGG CGCGCTGGGA CCGTTCCCGA CCAGGCGGGC GGCGGACGCG GCGGCGGAGG CGCTGCTGGA GGCCGTGCCG CTGCGGGCGT GCGCCCAGCG CATCCCGGCG CGCGGGGCGT CGGGCACGCC GTGCGCGCTG CTGGAGATGG GGCGCTGCAA GGCCCCGTGC GCGGGGCTGC AGGAGGTCGA CGACTACGCG GACGCGGTGG CGCGGGCTCG GGCGCTGATC GCCGGGGAGT CCACCGAGGC GCTCGGCGGC GCGGCGGCCA GGCTGGGCGA GCTGGCGCTG GAGGAGCGGT TCGAGGAGGC GGCCCTGCGG CGGGACCGGC TGGCCGGGCT GGTGCGGGCG CTGGACCGGG GGCAGCGGCT GGCCGCGCTC GCCGCGGTGG AGGAGCTGGT GGCGGCGCGG CCGGACGGCG CGGGCGGCTG GTGGTTCGCG GTGGTGCGGC ACGGCAGGCT GGCCAGCGCC GGGGTGGCCC CGCGCGGGGT GCCGCCGATG CCGGTGGTGG ACGCGCTGGT GGCGTCGGCG GAGACGGTGC TGCCCGGCGC GGGCCCGCTG CTGGGCGGCA GCGCCGAGGA GGTCGGCGTG GTGCTGCGGT GGGTGGAGCA GCCGGGGACC CGGATGGTGA GCTGCTCGCG CCCGTGGGCG GCGCCCGCGT GGGGCGCGGG GAGCTGGCGG ACCTGGGTGG GCGTGGCCGA GGCGGGACGC GACCAGTACC GGTTCGAGGG GCACTAG
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Protein sequence | MSGVTVPGMP TTPPAQLSFD ELGTPLRETT FVVFDLETTG PRAAEDGITE IGAVKVRGGR VIGEFGTLVD PERGIPPQIV ALTGITQNMV TGAPVLASVL PAFLEFAEGA VLVAHNSGFD VGFMKAACER HGYAWPKPPV VCTVKLARRV LSREEAPSCK LSALSALFGV PEAPNHRALV DARATVEVLH RLLERVGSVG VHSLEELLAY LPDVSPQQRR KRSLAADLPS APGVYLFRGP SEEVLYVGTA SDLRRRVRQY FTASETRHRL REMVALAVRV DWVECAHPLE AQVRELRLIA AHRPAYNRRS KNTASWWLAL TDEAFPRLSV VRTAREGALG PFPTRRAADA AAEALLEAVP LRACAQRIPA RGASGTPCAL LEMGRCKAPC AGLQEVDDYA DAVARARALI AGESTEALGG AAARLGELAL EERFEEAALR RDRLAGLVRA LDRGQRLAAL AAVEELVAAR PDGAGGWWFA VVRHGRLASA GVAPRGVPPM PVVDALVASA ETVLPGAGPL LGGSAEEVGV VLRWVEQPGT RMVSCSRPWA APAWGAGSWR TWVGVAEAGR DQYRFEGH
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