Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1331 |
Symbol | |
ID | 8325510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1472436 |
End bp | 1473782 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644941878 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003099129 |
Protein GI | 256375469 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000205805 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGGGTG AGCGGCGGGG GCGGGCGGCG CCGGGCGGGC TGCTGCTGTG CGGGCTGCTG CTGGGCGGGG CGCTCGCCGG GTGCGCGGAG CCCGAGGCCG GGTGGGAGGA GCGGAGCGGG CCCATCGTCT TCGCGGACTC GAAGGACACC TCGGTGGATC GGCAGATCGC CCGGCTGGTG GAGATGTGGA ACCGGTTCAA CCCGGACCAG CCGGTGTCGT TCCAGGAGCA GGCGACCGGC AGCGACGCCT ACCGGGCCCA GCTGATCGCC CACTCGCAGC GCAGCAAGCG GGAGGAGGGG GCGCCCTGCT ACGACGTGAT GGCCATGGAC GTGGTGTGGA CGGCGGAGTT CGCCGAGGGC GGGTTCCTGG CCGAGGTGTC GGACCGGGAC CTCGACCTGT CCGAGTTCCG GCCGGAGTCG CTGCGGGCCG CCCGGTACGC GCGGAGCGAG GAGCTGGGGC GGGCGCGGGA CGGGGCGGGC GCGTCGCGGC TGTGGGCGGT GCCCTGGCGG GCCGACGCGG GCCTGCTCTA CTACCGGACC GACCTGGTGG CCGAGCCGCC GACGAGCTTC GCGGGGCTGC GGGAGGCGGC GCTGGCGGTG AGCCGGAGGG AGCCGTCGGT CGCCGGGTAC GCGGGGCAGT TCCGGAAGGC GTACGAGGGG CTGTCGGTCA ACGCGTTCGA GGCGATGTGG GCGTTCGAGG GCGATCCGGT GCCGGTGGAC GCGCGGGGCG TGCCGCACCC GGCGCTGGAC GCGGGGTCGG CGATGGGGGT GCGGTCGCTG GTGGGCGCGG TGCGCGACGG GTGGTTGCCG CGGTCCACGC TGGACTACGA CGAGGACGCG AGCTGGCAGG CGTTCGGGCG GGGCGAGGTG GCGCTGATGC GCAACTGGCC CTACGCGTAC GCGCAGCTCA CCTCGCCCGA CCGGGCGGAG GGGTCGCTGG ACCCGGCGCT GATCGGCGTG GCGCCGCTGC CGTGGGAGAG CGCGCTGGGC GGGTGGAACC TGGGGGTGTC CACGTGCACG CGGCACGGGA GGACGGCGCG GGAGTTCGTC CGGTTCCTGA CCGACCCGGC GCGGCAGCGG ACGCTGCTGG AGCAGGCCGG GTTCGCGCCG ACCCGGACCT CGCTGTACGA GGACGAGTCG CTGTGGACCC CTCCGCACCT GAAGGTGCTG CGGGAGGCGC TGGACTCGGC GCGGCCCCGG CCTGCCGTGC CGAACTACGA CCTGCTGACG CGGTTGGTGC AGGAGCAGGT CGGGGAGGCG ATGCGGGACG GGCGGGCGGT GGACGCCAGG GTCGAGGCGC TGGCGGACGG GCTGACCACC CTGCCCGGAC TGGTCAGACC GGGCTGA
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Protein sequence | MWGERRGRAA PGGLLLCGLL LGGALAGCAE PEAGWEERSG PIVFADSKDT SVDRQIARLV EMWNRFNPDQ PVSFQEQATG SDAYRAQLIA HSQRSKREEG APCYDVMAMD VVWTAEFAEG GFLAEVSDRD LDLSEFRPES LRAARYARSE ELGRARDGAG ASRLWAVPWR ADAGLLYYRT DLVAEPPTSF AGLREAALAV SRREPSVAGY AGQFRKAYEG LSVNAFEAMW AFEGDPVPVD ARGVPHPALD AGSAMGVRSL VGAVRDGWLP RSTLDYDEDA SWQAFGRGEV ALMRNWPYAY AQLTSPDRAE GSLDPALIGV APLPWESALG GWNLGVSTCT RHGRTAREFV RFLTDPARQR TLLEQAGFAP TRTSLYEDES LWTPPHLKVL REALDSARPR PAVPNYDLLT RLVQEQVGEA MRDGRAVDAR VEALADGLTT LPGLVRPG
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