| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1331 |
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| Symbol | |
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| ID | 8325510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1472436 |
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| End bp | 1473782 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644941878 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003099129 |
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| Protein GI | 256375469 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000205805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGGTG AGCGGCGGGG GCGGGCGGCG CCGGGCGGGC TGCTGCTGTG CGGGCTGCTG
CTGGGCGGGG CGCTCGCCGG GTGCGCGGAG CCCGAGGCCG GGTGGGAGGA GCGGAGCGGG
CCCATCGTCT TCGCGGACTC GAAGGACACC TCGGTGGATC GGCAGATCGC CCGGCTGGTG
GAGATGTGGA ACCGGTTCAA CCCGGACCAG CCGGTGTCGT TCCAGGAGCA GGCGACCGGC
AGCGACGCCT ACCGGGCCCA GCTGATCGCC CACTCGCAGC GCAGCAAGCG GGAGGAGGGG
GCGCCCTGCT ACGACGTGAT GGCCATGGAC GTGGTGTGGA CGGCGGAGTT CGCCGAGGGC
GGGTTCCTGG CCGAGGTGTC GGACCGGGAC CTCGACCTGT CCGAGTTCCG GCCGGAGTCG
CTGCGGGCCG CCCGGTACGC GCGGAGCGAG GAGCTGGGGC GGGCGCGGGA CGGGGCGGGC
GCGTCGCGGC TGTGGGCGGT GCCCTGGCGG GCCGACGCGG GCCTGCTCTA CTACCGGACC
GACCTGGTGG CCGAGCCGCC GACGAGCTTC GCGGGGCTGC GGGAGGCGGC GCTGGCGGTG
AGCCGGAGGG AGCCGTCGGT CGCCGGGTAC GCGGGGCAGT TCCGGAAGGC GTACGAGGGG
CTGTCGGTCA ACGCGTTCGA GGCGATGTGG GCGTTCGAGG GCGATCCGGT GCCGGTGGAC
GCGCGGGGCG TGCCGCACCC GGCGCTGGAC GCGGGGTCGG CGATGGGGGT GCGGTCGCTG
GTGGGCGCGG TGCGCGACGG GTGGTTGCCG CGGTCCACGC TGGACTACGA CGAGGACGCG
AGCTGGCAGG CGTTCGGGCG GGGCGAGGTG GCGCTGATGC GCAACTGGCC CTACGCGTAC
GCGCAGCTCA CCTCGCCCGA CCGGGCGGAG GGGTCGCTGG ACCCGGCGCT GATCGGCGTG
GCGCCGCTGC CGTGGGAGAG CGCGCTGGGC GGGTGGAACC TGGGGGTGTC CACGTGCACG
CGGCACGGGA GGACGGCGCG GGAGTTCGTC CGGTTCCTGA CCGACCCGGC GCGGCAGCGG
ACGCTGCTGG AGCAGGCCGG GTTCGCGCCG ACCCGGACCT CGCTGTACGA GGACGAGTCG
CTGTGGACCC CTCCGCACCT GAAGGTGCTG CGGGAGGCGC TGGACTCGGC GCGGCCCCGG
CCTGCCGTGC CGAACTACGA CCTGCTGACG CGGTTGGTGC AGGAGCAGGT CGGGGAGGCG
ATGCGGGACG GGCGGGCGGT GGACGCCAGG GTCGAGGCGC TGGCGGACGG GCTGACCACC
CTGCCCGGAC TGGTCAGACC GGGCTGA
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| Protein sequence | MWGERRGRAA PGGLLLCGLL LGGALAGCAE PEAGWEERSG PIVFADSKDT SVDRQIARLV
EMWNRFNPDQ PVSFQEQATG SDAYRAQLIA HSQRSKREEG APCYDVMAMD VVWTAEFAEG
GFLAEVSDRD LDLSEFRPES LRAARYARSE ELGRARDGAG ASRLWAVPWR ADAGLLYYRT
DLVAEPPTSF AGLREAALAV SRREPSVAGY AGQFRKAYEG LSVNAFEAMW AFEGDPVPVD
ARGVPHPALD AGSAMGVRSL VGAVRDGWLP RSTLDYDEDA SWQAFGRGEV ALMRNWPYAY
AQLTSPDRAE GSLDPALIGV APLPWESALG GWNLGVSTCT RHGRTAREFV RFLTDPARQR
TLLEQAGFAP TRTSLYEDES LWTPPHLKVL REALDSARPR PAVPNYDLLT RLVQEQVGEA
MRDGRAVDAR VEALADGLTT LPGLVRPG
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