Gene Amir_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1326 
Symbol 
ID8325505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1466460 
End bp1467437 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content72% 
IMG OID644941873 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_003099124 
Protein GI256375464 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGT TCACCACCAC CACGCAGGTC ACCGGCACCA GGATCAGCGG CCTCGGCAGC 
TCCCAGCCGG ACACCGTGGT CTCGAACCAC GACCTGGCGC AGTACATGGA CACCTCGGAC 
GAGTGGATCC GGGACCGCGT CGGCATCGTG AACCGCCGCT TCGCGGGCCC CGACCTCTCG 
CTCGCGGACA TGGCCGTGGA CGCGGGCTCG AAGGCCGTCG CGGACGCGGG CCTGTCCCCG 
ACCGACATCG GCGCCGTGAT CGTGGCGACC TGCACCATGC CCTCGCCGAT CCCGAACGCG 
GCGGCGCAGG TCGCCGACCG CATCGGCGTG AAGGCCGCGC CCGCGTTCGA CGTGAACGCC 
GCGTGCGCGG GCTTCTGCTA CGCGCTGGCC GCCGCCTCGG ACATGGTGCG CGCGGGCAGC 
GCCAACCACG TCCTGGTGAT CGGCGCGGAG AAGCTCACCG ACTGGGTGCG CAAGGACGAC 
CGCTCGAACG CGATCATCTT CGCGGACGGC GCGGGCGCCG CGGTCGTGTC CGCGACCGAC 
GAGCCCGCCA TCGGCCCGGT GGTGTGGGGC AGCGCGGGCG ACATGTCGAA CCTGATCGAG 
ATCCCGGACC GGGACTCGTT CATCCACCAG GAGGGCCAGT CGGTGTTCCG CTGGGCCACC 
ACGCGGATCG CGCCGATCGC GCTGCGCGCC GTGGAGGCCG CGGGGCTGAC CGCCGCCGAC 
GTGGACGCGC TGGTGCCGCA CCAGGCGAAC CTGCGGATCG TCGAGGCCAT CGCGAAGAAG 
CTGCGCTCCA GCGGCGCGCG CGAGGACCTG GTCGTGGCGC GGGACATCGT CGAGTCGGGC 
AACACCTCGT CGGCGTCGAT CCCGCTGGCG ATGGACCACA TGCGGGCGTC GGGCGAGATC 
AAGAGCGGCG ACGTGCTGCT GCTGATCGGC TTCGGCGCGG GCCTGTCCTA CGCGGGGCAG 
GTCGTCCGCT GCCCCTGA
 
Protein sequence
MTAFTTTTQV TGTRISGLGS SQPDTVVSNH DLAQYMDTSD EWIRDRVGIV NRRFAGPDLS 
LADMAVDAGS KAVADAGLSP TDIGAVIVAT CTMPSPIPNA AAQVADRIGV KAAPAFDVNA 
ACAGFCYALA AASDMVRAGS ANHVLVIGAE KLTDWVRKDD RSNAIIFADG AGAAVVSATD 
EPAIGPVVWG SAGDMSNLIE IPDRDSFIHQ EGQSVFRWAT TRIAPIALRA VEAAGLTAAD 
VDALVPHQAN LRIVEAIAKK LRSSGAREDL VVARDIVESG NTSSASIPLA MDHMRASGEI 
KSGDVLLLIG FGAGLSYAGQ VVRCP