| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1319 |
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| Symbol | |
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| ID | 8325498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1456796 |
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| End bp | 1458490 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644941866 |
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| Product | ABC transporter related |
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| Protein accession | YP_003099117 |
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| Protein GI | 256375457 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.255891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTCCT ACCTGGCCGT GTTGGCCGGT CAGCGGCGCG GGGTGCTGGT GCTGCTGCTG
TGGTCGCTCG TCGAGGGCGT GCCCGCGCTG CTGTCCGGGC GGCTGGTCGC GCTGGCCGTC
GACCGGGGGT TCGCGGTCGG GGACCCGCGG GTCGGGGTGC TGTGGCTGGT GGGGTTCGCG
GCCGTCGCGG TGGCGGGCGC GGTCGGGCGG CGGCAGGTGT ACCGGGGGCT CGGGGTGGTG
GTCGAGCCGC TGCGGGACGC GCTGGTCACC GAGGTGGTGC GCGGGGTGCT GCACGGCGGG
CGCTCGCACC GGCGGACGCC GGACGCGAGC GCGGTCGCCC GGATCACCCG GCACGTCGAG
GTCGTGCGGG ACGCCACCGC CGGGCTGCTG GTGCAGGCGC GCGGGCTGCT GGTGACCACG
GTGGCCGCGC TGGTCGGGCT CGCCACGGTG GTGGACGGGC TGGCGTGGGC GGTGGTGCTG
CCGGTGCTGG TGTCGCTGGT GCTGTTCGCG ACGCTGCTGC CGTCGCTGGC GCGCGGGCAG
CGGGCGCTCG TGCTGGCCGA GGAGGACACC GCCGAGAACT CCGGCGCGGT GCTGCTCGGG
GTGCGCGACG TGGTGGCGTG CGGCGCCCAG GACGAGGCGC TGGGCGGGAT CGCGCGGCGG
GTCGACGCGC AGGCGGGCGC CTCGGTGCGG CTCGCCCGGT CGGCGGCGCT GCGCGGGGTG
GTGATCGGGC TCGGCGGGTT CGCGCCGGTG GTGCTGCTGG TGCTGCTCGC GCCGGGCAGC
GGGCTGTCGG CAGGCGGGCT GCTCGGGGCC GTGGTGTACC TGGGGACGAG CGTGCGGCCC
GCGCTGTCCG GACTGGCCGA CGTGGCCACG ACCGTGCTGC TGCGCCTGGT GGTGGCGCTG
CGCAGGCTCG CCGAGACCGC GCCCGTCGCG GTCGCGGGCG GCGACCTGGA ACCGGCGGGC
GCGGACGTGG TGCTGCGCGG GGTGACGTTC GGCTGGGGCG AGCGGGCCGA ACCGGTGGTG
CGGGACCTGG ACCTGGCGCT CGCGCCCGGC GACCACCTGG CGGTGGTGGG GCCCAGCGGC
ATCGGGAAGT CCACGCTCGC CGGGCTGGTG ACCGGGCTGG TCGCGCCGCG CGCGGGCCGG
GTGCTGCTGG GCGGGGTCCC GGTGCACCTG GTGCGGCCGG AGGTGCGGCG GGAGCGGGTC
GCGCTGGTGC CGCAGGAGAC CTACCTGTTC GCCGGGACCG TGCGGGAGAA CCTGGCGCTG
CTCGCCCCGG ACGCGGACGA CGGCGCGCTG CTGCGGTCGG TGGAGGCGGT CGGGGCCGGT
GTGGTGGTGC GGCGGCTCGG CGGGCTGGAC GGGGAGGTCG CGGCGGGCGG CGCGTCGGGG
TTGTCCGCAG GCGAGGCGCA GCTGCTCGCG GTGGCGCGGG TGCACGCGTG CCCGGCGGAC
GTGGTGCTGC TGGACGAGGC CACCTCCAGC CTGGACCCGG CGGCGGAAGC CGTGGTGGAG
CGGGCCTTCG CGGCGCGCGG CGGGGTGCTG GTGGTGATCG CGCACCGGCT GTCGTCGGCG
CTGCGGGCGG ACAAGGTGCT GGTGATGGAC GGCGGACCGG CGCTGCTGGG CGGGCACGCC
GAGCTGGTGG CCGCCTCACC GGCCTACGCG AACCTGATGG CCGCCTGGGA GGGCCCGAGG
GCCACTGCGG GCTGA
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| Protein sequence | MRSYLAVLAG QRRGVLVLLL WSLVEGVPAL LSGRLVALAV DRGFAVGDPR VGVLWLVGFA
AVAVAGAVGR RQVYRGLGVV VEPLRDALVT EVVRGVLHGG RSHRRTPDAS AVARITRHVE
VVRDATAGLL VQARGLLVTT VAALVGLATV VDGLAWAVVL PVLVSLVLFA TLLPSLARGQ
RALVLAEEDT AENSGAVLLG VRDVVACGAQ DEALGGIARR VDAQAGASVR LARSAALRGV
VIGLGGFAPV VLLVLLAPGS GLSAGGLLGA VVYLGTSVRP ALSGLADVAT TVLLRLVVAL
RRLAETAPVA VAGGDLEPAG ADVVLRGVTF GWGERAEPVV RDLDLALAPG DHLAVVGPSG
IGKSTLAGLV TGLVAPRAGR VLLGGVPVHL VRPEVRRERV ALVPQETYLF AGTVRENLAL
LAPDADDGAL LRSVEAVGAG VVVRRLGGLD GEVAAGGASG LSAGEAQLLA VARVHACPAD
VVLLDEATSS LDPAAEAVVE RAFAARGGVL VVIAHRLSSA LRADKVLVMD GGPALLGGHA
ELVAASPAYA NLMAAWEGPR ATAG
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