Gene Amir_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1314 
Symbol 
ID8325493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1451556 
End bp1452161 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content70% 
IMG OID644941861 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003099112 
Protein GI256375452 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.2142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTC AACCCGTTCA GCAGCGCGGT GCGGCCACGG TCACCGCCAT TCTGGACGCC 
TGCGCGTCGC TGCTGAACGA GCACGACTAC GACGACATCA CCACAGCCCG CATCGTCGAG 
CGCGCGGGCG TGCCGATCGG CTCCTTCTAC CAGTACTTCC CGGACAAGCG GTCCGTCGTG 
CACGCGCTCG CGCTGCGCGG GATGCAGGAC TACCTCGGCA AGGTCGAGAA CGTCTTCTCC 
GCCGGGAACC TCTCCGACGA CTGGCGCGAG GCCGTCGGCC AGGTCATCGG CATCTACCTC 
GGGATGCTGG TGGAGGCGCC GGGCTTCGGC CGGGTCCGGT TCAGCGACCT GCACGACGGG 
CACAGCCTCG ACTCCAGCAT CGACCAGTAC GAGCTCATGG CCGAGCGCCT GGCCGAGCTG 
TTCCTCACCC GCTACCCGGT GCGCGGCGAC GCGCCCGTCG CGCTGGCCTT CCGGATGGTC 
GCCCAGACCG CCGACGCCCT GTTCAAGCTG GCCGAGCGGG TCGCGCCGGA CGAGCGGCCC 
CAGGTGCTGC GGACCGCCAA CGGGGTGATC CTCCGGATGC TGTCCGGCGT CTTCGACCCC 
ACCTGA
 
Protein sequence
MRRQPVQQRG AATVTAILDA CASLLNEHDY DDITTARIVE RAGVPIGSFY QYFPDKRSVV 
HALALRGMQD YLGKVENVFS AGNLSDDWRE AVGQVIGIYL GMLVEAPGFG RVRFSDLHDG 
HSLDSSIDQY ELMAERLAEL FLTRYPVRGD APVALAFRMV AQTADALFKL AERVAPDERP 
QVLRTANGVI LRMLSGVFDP T