Gene Amir_1301 details

Gene Information

• Locus tag: Amir_1301
• ID: 8325480
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1435129
• End bp: 1437042
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 644941848
• Product: glycosyl transferase family 2
• Protein accession: YP_003099099
• Protein GI: 256375439
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCGGG GGGTGAAGGC GCACTGGGTC TCGCTGGGGG TGCTGCTGGC GCTGCTGATG 
GGGGTGCTGA GCTTCCACGC GCACGCCATC TCGCTGCCAG GGCACCGGGA CGCGCCGATC 
CGGGTGACCG ACCCGCCGGT GCCCGAGCGC ACGCTCGCGC TCGTGGTGCA CGGCGGTCCG 
CACCCGCGCT GGACTCCGAG GTTGCTGGAC GCGCTGGCCC GCACCGGAGC CAAGGCGACG 
TTCCACCTGG TCGGGGCGCG GGTCAACGAG AACCCGGACC TGGTGCGGCG GATGGTCGCC 
GAGGGGCACG AGGTCGGGGT CGAGTCGTTC CGGCCGGGTG AGCTGCGCCT GCTGGACGCC 
GCGTTCGCGC AGAGCGCGCT GATCGCGGCG GCGGGCGTGC GCAGCGAGCT GGCCGAGCGG 
GACGCCTGGT CGCCGGACCT GGAGGTGCAG GACGTCAAGG CGATCGCGGA GGCGGGCGCG 
CCCGCGAACG GGGCGGGCGC GGTGCTGCGG CTGCACGACA CCAGCAGCAC GCCCGGCGCG 
GTCGAGGAGC TGCGCCGGTT GTTGCCGGAC CACCGGTTCA CCACCCGCAC CGAGGCGGTC 
GGGGGACCGC CGCCGCACGC GCCCGCCGAC CGGGTGGAGC TGGCCACCGC GCACGCGCTG 
GCCTGGTCGC AGCGCAACGG CGACCTGCTG GTGCTGCTGC TGGACGTGGT CATCGGCGCG 
GTCGCGGCGC TGGCGGTGCT GCGGGTGCTC GTGCAGCTCG GCCTCGCGCA CACCGCGCGC 
AGGCTGCACC GCGAGCTGCC CGACGCGCCG CCCGGCCCGC TGCCGCCGGT GTCGGTGGTG 
GTGCCCGCCT ACAACGAGGC CGTCACCATC ACCGCCGCCG TCCGCTCGCT GGTGGCCTCG 
GACTACCCGG CCCCGGTCGA GGTGGTCGTG GTGGACGACG GCTCCGCGGA CGGCACCGCC 
GACGTGGTGC GCGCGCTGGA CCTGCCCGGC GTCCGGGTGG TCACCAGGGA GAACGGCGGC 
AAGGCGGAGG CGCTCAACAC CGGGGTGGCG CTGGCCGGGC ACGACGCGCT CGTCCTGGTC 
GACGGCGACA CGATCTTCGA GCCGGGCACG CTGGCCGCGC TCGTCGCCCC GCTGGGCGCG 
CCCGGCGTCG GCGCGGTGTC CGGCAACGTC AAGGTCGCCA ACCGGCGCGG GCTGCTCGGC 
CGCTGGCAGC ACCTGGAGTA CACCTCGGGC TCGAACCTGG ACCGGCAGAT CCTGAACGCC 
TGGCGGTGCC TGCCCACGAT CCCCGGCGCG GTCGGCGCGT TCCGCCGCGA GGCGCTGGTG 
GAGGTCGGCG GGGTCAGCTC GGACACGCTC GCCGAGGACA CCGACGTGAC CATGGCGATC 
ACCCGCGCGG GCTGGCGGGT GGTGTACGAG CCGGGCGCGC GGGCGTGGAC CGAGGTCCCG 
GCGGGGCTGC GGTCGCTGTA CCGGCAGCGC TACCGGTGGT CCTACGGCAC GTTCCAGGCC 
ATGTGGAAGC ACCGGGTCGC GGTGCGCGAG CAGGGCCGCA TGGGGCGGTT GGGGCTGCTG 
TACCTGCTGC TGTTCCACCT GCTGCTGCCG CTGCTGGCGC CGGTGATGGA CGTGTACGTG 
CTGTACGGCG CGCTCGTGGC GGACGCGCCC GCCGCGCTGC CGATCTGGCT GGCGTTCCTC 
GCGCTGCAGA CCGCGAGCGC CGGGTACGCG CTGCGGCTGG ACGGCGAGTC GCTGCGCCCG 
CTGTGGGCGT TCCCGCTGCA GCAGCTCGCC TACCGGCAGC TGACCTACCT GGTGGTGGTG 
CAGTCGCTGG TGACCGCCGC GCACGGCGTC CCGCTGCGCT GGCAGTCGAT CCAGCGCACC 
GGGCGCGCCG ACGCGGTGAG CCGGGAGGTC CTGGTGGGCG TGGAGGCGGC GTGA 

 

Protein sequence

MKRGVKAHWV SLGVLLALLM GVLSFHAHAI SLPGHRDAPI RVTDPPVPER TLALVVHGGP 
HPRWTPRLLD ALARTGAKAT FHLVGARVNE NPDLVRRMVA EGHEVGVESF RPGELRLLDA 
AFAQSALIAA AGVRSELAER DAWSPDLEVQ DVKAIAEAGA PANGAGAVLR LHDTSSTPGA 
VEELRRLLPD HRFTTRTEAV GGPPPHAPAD RVELATAHAL AWSQRNGDLL VLLLDVVIGA 
VAALAVLRVL VQLGLAHTAR RLHRELPDAP PGPLPPVSVV VPAYNEAVTI TAAVRSLVAS 
DYPAPVEVVV VDDGSADGTA DVVRALDLPG VRVVTRENGG KAEALNTGVA LAGHDALVLV 
DGDTIFEPGT LAALVAPLGA PGVGAVSGNV KVANRRGLLG RWQHLEYTSG SNLDRQILNA 
WRCLPTIPGA VGAFRREALV EVGGVSSDTL AEDTDVTMAI TRAGWRVVYE PGARAWTEVP 
AGLRSLYRQR YRWSYGTFQA MWKHRVAVRE QGRMGRLGLL YLLLFHLLLP LLAPVMDVYV 
LYGALVADAP AALPIWLAFL ALQTASAGYA LRLDGESLRP LWAFPLQQLA YRQLTYLVVV 
QSLVTAAHGV PLRWQSIQRT GRADAVSREV LVGVEAA